Detailed information NTG0673949

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: lgb_RS07510
• Genome accession: NZ_CP094882
• Coordinates: 1559227..1561374 (+)
• Length: 715 a.a.
• NCBI ID: WP_249663197.1
• Uniprot ID: -
• Organism: Lactococcus petauri strain B1726
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1547661..1561374	1559227..1561374	within	0

Gene organization within MGE regions

Location: 1547661..1561374

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
lgb_RS07455 (lgb_01483)	-	1547661..1548629 (-)	969	WP_051994473.1	putative phage abortive infection protein	-
lgb_RS07460 (lgb_01484)	-	1549017..1550783 (-)	1767	WP_249663193.1	UvrD-helicase domain-containing protein	-
lgb_RS07465 (lgb_01485)	-	1550785..1552926 (-)	2142	WP_003133039.1	AAA family ATPase	-
lgb_RS07470 (lgb_01486)	-	1553233..1553847 (-)	615	WP_249663194.1	hypothetical protein	-
lgb_RS07475 (lgb_01487)	-	1553882..1554226 (-)	345	WP_249663195.1	hypothetical protein	-
lgb_RS07480 (lgb_01488)	-	1554363..1554686 (+)	324	WP_249663196.1	helix-turn-helix domain-containing protein	-
lgb_RS07485 (lgb_01489)	-	1554852..1555877 (-)	1026	WP_035001824.1	hypothetical protein	-
lgb_RS10335	-	1556395..1556529 (+)	135	WP_368819573.1	putative holin-like toxin	-
lgb_RS07490 (lgb_01490)	-	1556721..1557578 (-)	858	WP_213439498.1	DUF5677 domain-containing protein	-
lgb_RS07495 (lgb_01491)	-	1557611..1558228 (-)	618	WP_003133045.1	recombinase family protein	-
lgb_RS07500 (lgb_01492)	garQ	1558550..1558762 (+)	213	WP_003133047.1	class II bacteriocin garvicin Q	-
lgb_RS07505 (lgb_01493)	-	1558786..1559100 (+)	315	WP_003133049.1	bacteriocin immunity protein	-
lgb_RS07510 (lgb_01494)	comA	1559227..1561374 (+)	2148	WP_249663197.1	peptide cleavage/export ABC transporter	Regulator

Sequence

Protein

• Length: 715 a.a.
• Molecular weight: 80689.19 Da
• Isoelectric Point: 8.2820

>NTDB_id=673949 lgb_RS07510 WP_249663197.1 1559227..1561374(+) (comA) [Lactococcus petauri strain B1726]
MRFKKKYYTSQVDERDCGCAALSMVLKTYGTEQSLASIRLLAGTTIEGTSALGIKKAAEHLKFSVQAFRADPTLFDTKKL
PYPFIVHVVKEKKYPHYYVVKSSNKKHIIIADPDPTVKIRKMTWDQFYSEWTGVTLFIAPQPSYKPVKEKSESLFSFIPI
LAKQKLLVFQIIIASLLVTLINIIGSYYLQNIIDEYVPNALMKTLSIVSLGLMATYLIQQFLNFAQTFLLTILGQRLAID
VILSYIRHIFQLPMSFFSTRRTGEITSRFSDANSIIDALASAILSLFLDVTIVILTGLVLGLQNMSLFFLVLFSIPLYVL
IIFIFIPLFEKQNNEVMQANSILNSSIIEDINGIETIKSLGSEEIRYQKIDREFADYMKKSFTRQKSEAFQTALKSGLQL
VLNVLILWYGATLVMSQKITLGQLITFNALLSYFMTPLSNIINLQTKLQSAKVANHRLNEVYLVDSEFDTNTDEVILSNF
EMQLIGISYHYGFGRDILSNMSLNIKENEKLTIVGMSGSGKSTLVKLLVNFFEPTQGTIILGGIDIKQMDKHQLRSIVSY
LPQQPYIFTGTVLENLILGASEDLSQEEIFQAVEAAEIRSDIEQLQLGYQTELSSDATTLSGGQKQRIALARALLSPAKI
LIFDEATSNLDVITEKKILKNLFKLDKTIIFIAHRLSIAEKSDRIIVIDQGKIMEEGSHLELLSKNGFYAQIYNQ

Nucleotide

• Length: 2148 bp

>NTDB_id=673949 lgb_RS07510 WP_249663197.1 1559227..1561374(+) (comA) [Lactococcus petauri strain B1726]
ATGCGTTTTAAAAAGAAATATTATACGTCACAAGTGGACGAAAGAGATTGTGGGTGTGCTGCTCTTTCCATGGTTTTAAA
AACTTATGGTACAGAACAATCCTTAGCTTCAATACGTTTACTTGCTGGTACAACGATAGAAGGCACTTCTGCTTTAGGTA
TAAAAAAAGCCGCGGAACATTTAAAGTTCAGCGTTCAAGCCTTTCGTGCAGATCCAACTCTATTTGATACAAAGAAACTT
CCTTATCCATTTATTGTTCATGTGGTTAAAGAAAAGAAATACCCTCACTATTATGTGGTTAAATCCTCCAATAAAAAACA
TATCATTATTGCAGATCCAGATCCCACGGTTAAAATTCGGAAAATGACTTGGGACCAGTTTTATTCTGAATGGACAGGTG
TAACTTTATTTATTGCTCCTCAACCTTCTTATAAACCAGTGAAAGAAAAATCCGAGTCTTTGTTTTCTTTTATACCCATA
CTCGCAAAGCAAAAGTTGCTTGTTTTTCAGATTATTATTGCTTCTCTTTTGGTCACTTTAATTAATATTATCGGCTCTTA
TTATCTTCAGAATATTATTGACGAATATGTGCCTAATGCTTTAATGAAGACTTTAAGCATTGTTTCTCTCGGATTAATGG
CAACCTATCTCATCCAGCAATTCCTTAATTTTGCTCAAACTTTCTTACTTACAATACTTGGACAACGTTTAGCCATTGAT
GTTATCCTTTCCTATATCCGTCATATTTTTCAACTTCCTATGTCCTTTTTTTCTACACGAAGAACGGGAGAAATTACCAG
TCGTTTCTCTGACGCTAATTCAATTATTGATGCCCTTGCTTCTGCCATCTTATCTCTTTTCTTAGATGTCACGATTGTCA
TTCTGACAGGGCTTGTTTTAGGACTTCAAAACATGAGCTTATTCTTCCTTGTCTTGTTTTCCATTCCACTTTATGTTCTT
ATCATTTTTATTTTTATTCCTTTATTTGAAAAACAAAATAATGAAGTCATGCAAGCAAATTCTATTTTAAATTCATCAAT
TATTGAAGATATCAATGGAATTGAAACCATAAAATCTCTTGGGAGTGAAGAGATTCGCTATCAAAAAATAGACCGTGAAT
TTGCGGACTACATGAAAAAATCATTCACGCGTCAAAAATCCGAAGCTTTTCAAACTGCCTTGAAATCAGGATTACAACTT
GTTTTAAATGTTCTTATCTTGTGGTATGGAGCCACCCTCGTGATGAGCCAAAAAATCACCTTAGGTCAATTGATTACTTT
CAATGCCTTACTTTCATATTTTATGACTCCTCTCTCTAATATCATCAACTTACAAACTAAACTTCAATCCGCTAAAGTAG
CTAACCATCGTTTAAATGAAGTTTACTTGGTAGACAGTGAATTTGATACAAATACAGATGAAGTTATTCTTTCAAATTTT
GAGATGCAGTTGATAGGTATATCTTACCACTATGGTTTTGGTAGAGACATTCTCTCTAATATGTCACTTAATATAAAAGA
AAATGAAAAATTAACAATTGTCGGAATGAGTGGCTCAGGTAAAAGTACCCTAGTCAAATTGTTGGTTAATTTTTTCGAAC
CTACACAAGGGACTATCATTCTTGGGGGGATAGATATAAAACAAATGGATAAGCACCAATTGAGAAGTATTGTCAGCTAT
CTTCCCCAACAACCGTATATCTTTACAGGAACAGTACTAGAGAACTTAATCTTAGGAGCAAGTGAGGATCTTTCTCAGGA
AGAAATTTTCCAAGCTGTTGAAGCTGCAGAAATTCGTTCCGACATTGAACAGCTTCAATTGGGCTATCAAACAGAACTAT
CTAGTGATGCTACAACTCTCTCTGGAGGGCAAAAACAAAGAATCGCATTGGCTCGTGCCTTACTTTCTCCCGCGAAGATT
CTTATTTTTGATGAAGCAACAAGTAATCTGGATGTAATTACCGAGAAAAAAATTTTGAAAAATCTATTTAAGTTAGATAA
AACCATTATTTTTATTGCCCATCGTCTGTCTATCGCGGAAAAGAGCGACAGGATTATTGTTATTGATCAGGGAAAAATTA
TGGAAGAAGGGAGTCATTTAGAACTGCTTTCTAAAAATGGTTTTTATGCACAAATTTATAATCAATAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (498-648)

• ABC transporter transmembrane region (ABC_membrane) (170-438)

• Peptidase C39 family (Peptidase_C39) (6-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus gordonii str. Challis substr. CH1	60.615	100	0.607
comA	Streptococcus mitis SK321	59.497	100	0.596
comA	Streptococcus mitis NCTC 12261	59.358	100	0.594
comA	Streptococcus pneumoniae D39	59.218	100	0.593
comA	Streptococcus pneumoniae Rx1	59.218	100	0.593
comA	Streptococcus pneumoniae R6	59.218	100	0.593
comA/nlmT	Streptococcus mutans UA159	58.996	100	0.592
comA	Streptococcus pneumoniae TIGR4	58.939	100	0.59