Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | MT488_RS01375 | Genome accession | NZ_CP094841 |
| Coordinates | 295249..295776 (+) | Length | 175 a.a. |
| NCBI ID | WP_020882840.1 | Uniprot ID | A0A839BRA2 |
| Organism | Enterobacter ludwigii strain Sb-9 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 290249..300776
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MT488_RS01355 (MT488_01355) | aphA | 290572..291285 (+) | 714 | WP_106503638.1 | acid phosphatase AphA | - |
| MT488_RS01360 (MT488_01360) | - | 291399..291815 (+) | 417 | WP_014168218.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| MT488_RS01365 (MT488_01365) | - | 291818..292171 (+) | 354 | WP_014168219.1 | MmcQ/YjbR family DNA-binding protein | - |
| MT488_RS01370 (MT488_01370) | uvrA | 292175..294997 (-) | 2823 | WP_244047594.1 | excinuclease ABC subunit UvrA | - |
| MT488_RS01375 (MT488_01375) | ssb | 295249..295776 (+) | 528 | WP_020882840.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| MT488_RS01380 (MT488_01380) | - | 295840..296121 (-) | 282 | WP_020882839.1 | YjcB family protein | - |
| MT488_RS01385 (MT488_01385) | - | 296611..298011 (+) | 1401 | WP_244047595.1 | sensor domain-containing diguanylate cyclase | - |
| MT488_RS01390 (MT488_01390) | - | 298351..299916 (+) | 1566 | WP_025206387.1 | EAL domain-containing protein | - |
| MT488_RS01395 (MT488_01395) | soxS | 299923..300249 (-) | 327 | WP_013095071.1 | superoxide response transcriptional regulator SoxS | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 18705.74 Da Isoelectric Point: 5.2456
>NTDB_id=673522 MT488_RS01375 WP_020882840.1 295249..295776(+) (ssb) [Enterobacter ludwigii strain Sb-9]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPA
PSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPA
PSNEPPMDFDDDIPF
Nucleotide
Download Length: 528 bp
>NTDB_id=673522 MT488_RS01375 WP_020882840.1 295249..295776(+) (ssb) [Enterobacter ludwigii strain Sb-9]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCTGGTGAGTATCTGCGTAAAGGTTCTCAGGTTTATATT
GAAGGCCAACTGCGTACCCGCAAATGGACCGATCAAGCCGGCGCTGAGAAGTACACCACGGAAGTTGTGGTCAACGTGGG
TGGCACCATGCAGATGCTCGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGTCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGTGGCGCGCAGTCTCGCCCACAGCAGCAGTCCGCGCCAGCA
CCGTCTAACGAACCCCCAATGGACTTCGACGACGATATTCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCGGAAGTGGCTGGTGAGTATCTGCGTAAAGGTTCTCAGGTTTATATT
GAAGGCCAACTGCGTACCCGCAAATGGACCGATCAAGCCGGCGCTGAGAAGTACACCACGGAAGTTGTGGTCAACGTGGG
TGGCACCATGCAGATGCTCGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGTCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGTGGCGCGCAGTCTCGCCCACAGCAGCAGTCCGCGCCAGCA
CCGTCTAACGAACCCCCAATGGACTTCGACGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
75.556 |
100 |
0.777 |
| ssb | Glaesserella parasuis strain SC1401 |
56.522 |
100 |
0.594 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.474 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.474 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.366 |