Detailed information NTG0067246

Bioinformatically predicted

Overview

• Name: cclA/cilC
• Type: Machinery gene
• Locus tag: SITYG_RS02645
• Genome accession: NZ_AP014880
• Coordinates: 511250..511933 (-)
• Length: 227 a.a.
• NCBI ID: WP_096362597.1
• Uniprot ID: A0AAD1C7J9
• Organism: Streptococcus intermedius strain TYG1620
• Function: processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 506250..516933

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SITYG_RS02615 (SITYG_04990)	rsmD	506730..507269 (+)	540	WP_048784924.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
SITYG_RS02620 (SITYG_05000)	coaD	507259..507756 (+)	498	WP_003078294.1	pantetheine-phosphate adenylyltransferase	-
SITYG_RS02625 (SITYG_05010)	sepM	507737..508792 (+)	1056	WP_003073620.1	SepM family pheromone-processing serine protease	Regulator
SITYG_RS02630 (SITYG_05020)	-	509074..509637 (+)	564	WP_096362594.1	YutD family protein	-
SITYG_RS02635 (SITYG_05030)	rlmN	509671..510753 (+)	1083	WP_096362595.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
SITYG_RS02640 (SITYG_05040)	-	510746..511264 (+)	519	WP_096362596.1	VanZ family protein	-
SITYG_RS02645 (SITYG_05050)	cclA/cilC	511250..511933 (-)	684	WP_096362597.1	prepilin peptidase	Machinery gene
SITYG_RS02650 (SITYG_05060)	-	512085..512612 (+)	528	WP_003078413.1	Dps family protein	-
SITYG_RS02655 (SITYG_05070)	-	512875..513099 (+)	225	WP_003073604.1	YqgQ family protein	-
SITYG_RS02660 (SITYG_05080)	-	513093..513473 (+)	381	WP_009568163.1	rhodanese-like domain-containing protein	-
SITYG_RS02665 (SITYG_05090)	-	513494..514219 (-)	726	WP_009568164.1	16S rRNA pseudouridine(516) synthase	-
SITYG_RS02670 (SITYG_05100)	typA	514400..516241 (+)	1842	WP_009568165.1	translational GTPase TypA	-
SITYG_RS02675 (SITYG_05110)	-	516304..516588 (+)	285	WP_003073594.1	DUF3165 family protein	-

Sequence

Protein

• Length: 227 a.a.
• Molecular weight: 25631.01 Da
• Isoelectric Point: 8.2377

>NTDB_id=67246 SITYG_RS02645 WP_096362597.1 511250..511933(-) (cclA/cilC) [Streptococcus intermedius strain TYG1620]
MIHFYFFLVGSIVASFLGLVVDRFPEQSIIIPSSHCNTCGQKLTPRDLVPILSQLINRLRCRFCGEKIPIRYILLELTGG
CLFLVTSLGYLNINQLILLVSGMTLSLYDQRHQEYPLLIWLFSHVLLIFLTGFNLLMAIFLALGILTHFIDLRIGAGDFL
FLASCSAIFNLTEVLLVLQISSIIGLFLFCLKSRKDRLAFIPCLFGASSILILIKFVVFHQNILCLI

Nucleotide

• Length: 684 bp

>NTDB_id=67246 SITYG_RS02645 WP_096362597.1 511250..511933(-) (cclA/cilC) [Streptococcus intermedius strain TYG1620]
ATGATTCATTTTTATTTTTTCTTGGTTGGAAGTATTGTAGCTTCCTTTTTAGGACTGGTCGTTGATCGCTTTCCTGAACA
ATCTATTATCATCCCTTCCAGTCATTGCAATACTTGTGGACAAAAATTAACTCCACGTGATTTAGTCCCTATCCTCTCAC
AACTCATCAATCGTCTACGTTGTCGCTTTTGTGGTGAAAAAATTCCCATCCGCTACATTCTCCTAGAACTAACTGGTGGA
TGTCTCTTTCTTGTAACGTCTTTAGGCTATCTAAACATCAACCAGCTCATCCTGCTTGTATCTGGGATGACCTTATCCCT
TTATGATCAGAGACATCAAGAGTATCCTCTGCTTATTTGGCTATTTTCCCATGTCCTTCTTATCTTTTTAACTGGTTTCA
ATCTTTTGATGGCTATTTTTTTAGCCCTTGGAATTTTAACTCATTTCATTGATTTGCGCATTGGAGCGGGAGATTTTCTT
TTTCTAGCATCCTGTTCAGCGATTTTTAATCTCACAGAAGTTCTCCTTGTTCTTCAAATTTCCAGCATCATCGGCCTGTT
CCTTTTTTGTTTAAAGTCAAGAAAAGACAGGTTAGCATTTATTCCCTGTCTTTTTGGTGCTAGCAGCATTCTGATTTTGA
TAAAATTCGTTGTTTTCCACCAAAATATTTTATGCCTTATTTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (8-87)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cclA/cilC	Streptococcus mitis SK321	56.744	94.714	0.537
cclA/cilC	Streptococcus mitis NCTC 12261	55.814	94.714	0.529
cclA/cilC	Streptococcus pneumoniae Rx1	55.814	94.714	0.529
cclA/cilC	Streptococcus pneumoniae D39	55.814	94.714	0.529
cclA/cilC	Streptococcus pneumoniae R6	55.814	94.714	0.529
cclA/cilC	Streptococcus pneumoniae TIGR4	55.349	94.714	0.524