Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | SITYG_RS02625 | Genome accession | NZ_AP014880 |
| Coordinates | 507737..508792 (+) | Length | 351 a.a. |
| NCBI ID | WP_003073620.1 | Uniprot ID | A0AAD1FJ17 |
| Organism | Streptococcus intermedius strain TYG1620 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 502737..513792
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SITYG_RS02595 (SITYG_04950) | - | 503255..503890 (-) | 636 | WP_096362592.1 | YigZ family protein | - |
| SITYG_RS02600 (SITYG_04960) | comFA/cflA | 503947..505248 (+) | 1302 | WP_096362593.1 | DEAD/DEAH box helicase | Machinery gene |
| SITYG_RS02605 (SITYG_04970) | - | 505245..505910 (+) | 666 | WP_003078227.1 | ComF family protein | - |
| SITYG_RS02610 (SITYG_04980) | hpf | 505989..506531 (+) | 543 | WP_003073626.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| SITYG_RS02615 (SITYG_04990) | rsmD | 506730..507269 (+) | 540 | WP_048784924.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| SITYG_RS02620 (SITYG_05000) | coaD | 507259..507756 (+) | 498 | WP_003078294.1 | pantetheine-phosphate adenylyltransferase | - |
| SITYG_RS02625 (SITYG_05010) | sepM | 507737..508792 (+) | 1056 | WP_003073620.1 | SepM family pheromone-processing serine protease | Regulator |
| SITYG_RS02630 (SITYG_05020) | - | 509074..509637 (+) | 564 | WP_096362594.1 | YutD family protein | - |
| SITYG_RS02635 (SITYG_05030) | rlmN | 509671..510753 (+) | 1083 | WP_096362595.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| SITYG_RS02640 (SITYG_05040) | - | 510746..511264 (+) | 519 | WP_096362596.1 | VanZ family protein | - |
| SITYG_RS02645 (SITYG_05050) | cclA/cilC | 511250..511933 (-) | 684 | WP_096362597.1 | prepilin peptidase | Machinery gene |
| SITYG_RS02650 (SITYG_05060) | - | 512085..512612 (+) | 528 | WP_003078413.1 | Dps family protein | - |
| SITYG_RS02655 (SITYG_05070) | - | 512875..513099 (+) | 225 | WP_003073604.1 | YqgQ family protein | - |
| SITYG_RS02660 (SITYG_05080) | - | 513093..513473 (+) | 381 | WP_009568163.1 | rhodanese-like domain-containing protein | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 38477.49 Da Isoelectric Point: 10.2603
>NTDB_id=67245 SITYG_RS02625 WP_003073620.1 507737..508792(+) (sepM) [Streptococcus intermedius strain TYG1620]
MKKTRNKFKKWPIVFVVGLVLLFISFVVPLPYYIEVPGSAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDISLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFSSSKDLIDYVGSQKIGSKVKVNYVEDGQKKSAIGKIIKLENGKNGIGISLIDRTEVTSSIPIEFSTAGIGGPSAGL
MFSLAIYTQIAEPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEAKKANSKAKTNYETAL
EAAKKIKTKMKIVPVKNLQDAIDYLKRTKKS
MKKTRNKFKKWPIVFVVGLVLLFISFVVPLPYYIEVPGSAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDISLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFSSSKDLIDYVGSQKIGSKVKVNYVEDGQKKSAIGKIIKLENGKNGIGISLIDRTEVTSSIPIEFSTAGIGGPSAGL
MFSLAIYTQIAEPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEAKKANSKAKTNYETAL
EAAKKIKTKMKIVPVKNLQDAIDYLKRTKKS
Nucleotide
Download Length: 1056 bp
>NTDB_id=67245 SITYG_RS02625 WP_003073620.1 507737..508792(+) (sepM) [Streptococcus intermedius strain TYG1620]
ATGAAAAAAACAAGAAATAAATTTAAAAAATGGCCGATAGTATTTGTGGTAGGGTTGGTCCTTCTTTTTATCTCTTTTGT
AGTTCCTCTGCCTTATTATATTGAAGTACCAGGTAGTGCAGCAGACGTCCGTCAGGTTTTGCGTGTGGATAACAAAGAAG
ATAAGGAAAAAGGTTCTTACAATTTTGTGACAGTTGGGATTCAGCATGCTACCTTTGCTCATTTAGTTTATGCTTGGCTG
ACCCCTTTTACAGATATTTATTCAGCGAAAGATTTGACTGGCGGAACTTCCGATAAAGAATATATGCGAATCAATCAATT
TTATATGGAAACATCACAAAACTTAGCCAAATATCAAGGGTTAAAAAAAGCAGGAAAGGATATCAGCCTGAAATATTTGG
GCGTCTATGTGTTACAAGTTACCAAAAACTCAACCTTTAAGGGCATTTTAAATATTGCAGATACTGTGACAGGTGTGAAT
GATAAGACTTTTAGTAGTTCAAAAGACTTGATTGATTATGTAGGTTCACAGAAGATTGGTAGTAAGGTAAAAGTAAATTA
TGTTGAAGACGGTCAGAAAAAATCTGCTATAGGTAAAATCATCAAACTTGAAAATGGGAAAAATGGAATTGGTATTAGCT
TGATTGACCGGACAGAGGTTACGAGTAGTATACCGATTGAATTCTCAACTGCGGGAATTGGCGGACCAAGTGCGGGCTTG
ATGTTTAGTTTGGCAATTTATACACAGATTGCTGAACCAACATTAAGAGACGGTAGAAATATTGCTGGTACGGGCTCAAT
TGACCGTGAAGGAAAAGTTGGCGATATTGGAGGCATTGATAAAAAGGTGGTCTCAGCAGCCAAAAATGGTGCAGAAATTT
TCTTTGCACCAAATAATCCAGTCACCAAAGAAGCTAAAAAAGCCAATTCTAAAGCGAAAACAAATTATGAAACAGCTTTG
GAAGCTGCTAAAAAAATTAAAACCAAAATGAAAATTGTACCTGTCAAGAACTTGCAAGATGCTATTGATTACCTCAAACG
CACCAAGAAATCTTAA
ATGAAAAAAACAAGAAATAAATTTAAAAAATGGCCGATAGTATTTGTGGTAGGGTTGGTCCTTCTTTTTATCTCTTTTGT
AGTTCCTCTGCCTTATTATATTGAAGTACCAGGTAGTGCAGCAGACGTCCGTCAGGTTTTGCGTGTGGATAACAAAGAAG
ATAAGGAAAAAGGTTCTTACAATTTTGTGACAGTTGGGATTCAGCATGCTACCTTTGCTCATTTAGTTTATGCTTGGCTG
ACCCCTTTTACAGATATTTATTCAGCGAAAGATTTGACTGGCGGAACTTCCGATAAAGAATATATGCGAATCAATCAATT
TTATATGGAAACATCACAAAACTTAGCCAAATATCAAGGGTTAAAAAAAGCAGGAAAGGATATCAGCCTGAAATATTTGG
GCGTCTATGTGTTACAAGTTACCAAAAACTCAACCTTTAAGGGCATTTTAAATATTGCAGATACTGTGACAGGTGTGAAT
GATAAGACTTTTAGTAGTTCAAAAGACTTGATTGATTATGTAGGTTCACAGAAGATTGGTAGTAAGGTAAAAGTAAATTA
TGTTGAAGACGGTCAGAAAAAATCTGCTATAGGTAAAATCATCAAACTTGAAAATGGGAAAAATGGAATTGGTATTAGCT
TGATTGACCGGACAGAGGTTACGAGTAGTATACCGATTGAATTCTCAACTGCGGGAATTGGCGGACCAAGTGCGGGCTTG
ATGTTTAGTTTGGCAATTTATACACAGATTGCTGAACCAACATTAAGAGACGGTAGAAATATTGCTGGTACGGGCTCAAT
TGACCGTGAAGGAAAAGTTGGCGATATTGGAGGCATTGATAAAAAGGTGGTCTCAGCAGCCAAAAATGGTGCAGAAATTT
TCTTTGCACCAAATAATCCAGTCACCAAAGAAGCTAAAAAAGCCAATTCTAAAGCGAAAACAAATTATGAAACAGCTTTG
GAAGCTGCTAAAAAAATTAAAACCAAAATGAAAATTGTACCTGTCAAGAACTTGCAAGATGCTATTGATTACCTCAAACG
CACCAAGAAATCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
63.478 |
98.291 |
0.624 |