Detailed information NTG0668478

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OG338_RS01645
• Genome accession: NZ_CP108983
• Coordinates: 385545..386579 (-)
• Length: 344 a.a.
• NCBI ID: WP_405935609.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00726
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 380545..391579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG338_RS01615 (OG338_01610)	-	381081..382016 (+)	936	WP_405935603.1	M56 family metallopeptidase	-
OG338_RS01620 (OG338_01615)	-	382142..382834 (+)	693	WP_405935604.1	phosphatase PAP2 family protein	-
OG338_RS01625 (OG338_01620)	-	382907..383608 (+)	702	WP_405935605.1	HAD family hydrolase	-
OG338_RS01630 (OG338_01625)	-	383679..383858 (+)	180	WP_405935606.1	hypothetical protein	-
OG338_RS01635 (OG338_01630)	-	383999..384367 (-)	369	WP_405935607.1	ArsR/SmtB family transcription factor	-
OG338_RS01640 (OG338_01635)	-	384475..385545 (-)	1071	WP_405935608.1	aldose epimerase family protein	-
OG338_RS01645 (OG338_01640)	cytR	385545..386579 (-)	1035	WP_405935609.1	LacI family DNA-binding transcriptional regulator	Regulator
OG338_RS01650 (OG338_01645)	-	386689..387744 (-)	1056	WP_405935610.1	ABC transporter permease	-
OG338_RS01655 (OG338_01650)	-	387741..388715 (-)	975	WP_405935611.1	ABC transporter permease	-
OG338_RS01660 (OG338_01655)	-	388712..390367 (-)	1656	WP_405935612.1	sugar ABC transporter ATP-binding protein	-
OG338_RS01665 (OG338_01660)	-	390484..391572 (-)	1089	WP_405935613.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 37608.78 Da
• Isoelectric Point: 6.5829

>NTDB_id=668478 OG338_RS01645 WP_405935609.1 385545..386579(-) (cytR) [Streptomyces sp. NBC_00726]
MGVSLKDVAQRAGVSIKTVSNVVNNYQHVTPKMRAKVQQAIDELGYRPNLTARHLRKGRTGIIALAVPEFGNPYFAELAG
AVVDAAARHDYTVLVDHTGGLREKELLVSQGFRSHVIDGLILSPIHLETEDLMARTETAPLVLLGEREYEAPYDHIAIDN
VAAAREAVRHLIGLGHRRIAFLGSRTGRERQPAHLRLRGWREELAAAGIEPDEALVVVTDGYGREDGAAAMAALLDRGER
PDAVFAYNDLIAIGAMRTLTARGLRIPEDVAVVGFDDIEESLYGATTLTTVAPDKEAIARLAVDSLVERLSGEPVAEPRR
PRPGYRLVVRESTVPRPSDRPKDH

Nucleotide

• Length: 1035 bp

>NTDB_id=668478 OG338_RS01645 WP_405935609.1 385545..386579(-) (cytR) [Streptomyces sp. NBC_00726]
GTGGGCGTCAGCCTCAAGGACGTTGCACAACGGGCGGGCGTGTCCATCAAGACCGTGTCGAACGTGGTGAACAACTATCA
GCACGTCACACCGAAGATGCGCGCCAAGGTGCAGCAGGCCATCGACGAGCTCGGCTACCGGCCGAACCTCACCGCCCGTC
ATCTGCGCAAGGGCCGCACCGGGATCATCGCGCTCGCCGTCCCCGAGTTCGGCAACCCGTACTTCGCGGAGCTGGCCGGT
GCGGTGGTCGACGCCGCCGCCCGGCACGACTACACCGTGCTGGTCGACCACACCGGCGGACTGCGCGAGAAGGAACTCCT
CGTCAGCCAGGGATTCCGGTCCCACGTCATCGACGGGCTCATCCTCAGCCCGATCCACCTGGAGACCGAGGACCTGATGG
CGCGCACCGAGACCGCGCCCCTGGTCCTGCTCGGCGAGCGCGAGTACGAGGCCCCGTACGACCACATCGCCATCGACAAC
GTCGCCGCGGCGCGCGAGGCGGTACGCCACCTCATCGGGCTCGGCCACCGCCGGATCGCCTTCCTCGGCTCCCGTACCGG
CCGCGAACGCCAGCCCGCCCACCTCCGGCTGCGCGGCTGGCGCGAGGAGCTGGCCGCCGCCGGCATCGAGCCCGACGAGG
CGCTGGTCGTCGTCACCGACGGCTACGGCCGCGAGGACGGCGCCGCCGCCATGGCCGCGCTCCTCGACCGCGGCGAGCGG
CCCGACGCCGTCTTCGCGTACAACGACCTCATCGCCATCGGCGCCATGCGCACCCTGACCGCACGCGGTCTGCGTATCCC
CGAGGACGTCGCCGTCGTCGGCTTCGACGACATCGAGGAGAGCCTCTACGGCGCGACCACGCTCACCACCGTGGCGCCCG
ACAAGGAGGCCATTGCCCGGCTCGCCGTCGACAGCCTGGTCGAGCGCCTGTCCGGCGAGCCGGTGGCGGAGCCCAGGCGG
CCCCGGCCCGGCTACCGGCTCGTCGTCCGCGAATCCACCGTTCCCCGGCCTTCCGACCGCCCCAAGGACCATTGA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-333)

• Bacterial regulatory proteins, lacI family (LacI) (4-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	35.714	100	0.363