Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilO   Type   Machinery gene
Locus tag   MOW14_RS12770 Genome accession   NZ_CP094258
Coordinates   2662771..2663490 (-) Length   239 a.a.
NCBI ID   WP_005180513.1    Uniprot ID   N9KYM2
Organism   Acinetobacter indicus strain BDT201     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2657771..2668490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW14_RS12750 (MOW14_12750) aroB 2658358..2659440 (-) 1083 WP_075167859.1 3-dehydroquinate synthase -
  MOW14_RS12755 (MOW14_12755) aroK 2659463..2660005 (-) 543 WP_075167858.1 shikimate kinase AroK -
  MOW14_RS12760 (MOW14_12760) pilQ 2660042..2662183 (-) 2142 WP_180006629.1 type IV pilus secretin PilQ family protein Machinery gene
  MOW14_RS12765 (MOW14_12765) pilP 2662244..2662771 (-) 528 WP_104489345.1 pilus assembly protein PilP Machinery gene
  MOW14_RS12770 (MOW14_12770) pilO 2662771..2663490 (-) 720 WP_005180513.1 type 4a pilus biogenesis protein PilO Machinery gene
  MOW14_RS12775 (MOW14_12775) pilN 2663487..2664122 (-) 636 WP_005180516.1 PilN domain-containing protein Machinery gene
  MOW14_RS12780 (MOW14_12780) pilM 2664122..2665180 (-) 1059 WP_104505685.1 pilus assembly protein PilM Machinery gene
  MOW14_RS12785 (MOW14_12785) ponA 2665351..2667927 (+) 2577 WP_180006566.1 penicillin-binding protein PBP1a -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 27087.71 Da        Isoelectric Point: 5.1311

>NTDB_id=668440 MOW14_RS12770 WP_005180513.1 2662771..2663490(-) (pilO) [Acinetobacter indicus strain BDT201]
MSLDQYEEMNQDPVAAPKKKMTLDKFLQQWNTLDPNNYGSWPFSVKLTIWIFIIILIAFLGYFLAIKPKLDAISNARAQE
QNLLNEFREKDSKLRNLQQYQAQLQEMEANFNQQLQQLPKETEIPGLVEDVNVTGVNSGLRFKNIRLENEIKQEFFIEQP
ISIEATGDYHAFGSFVSGTAALPRIVTMHDFTITAGENKEKKTDIPQITYVAKAKTYRYVGNTDAQAGNSTTPATGAAQ

Nucleotide


Download         Length: 720 bp        

>NTDB_id=668440 MOW14_RS12770 WP_005180513.1 2662771..2663490(-) (pilO) [Acinetobacter indicus strain BDT201]
ATGAGTCTCGATCAATATGAAGAAATGAATCAGGATCCTGTTGCTGCGCCAAAGAAAAAAATGACGCTGGATAAATTCCT
GCAGCAATGGAATACCTTAGATCCGAATAACTATGGCAGCTGGCCGTTTTCCGTCAAGCTGACCATCTGGATCTTTATTA
TTATTTTAATTGCCTTCTTGGGCTATTTCCTGGCCATCAAGCCGAAGCTGGATGCAATTTCCAATGCGCGTGCACAAGAG
CAGAACCTGCTGAATGAGTTTCGTGAAAAAGATTCCAAACTGCGTAACTTGCAGCAATATCAGGCGCAGTTACAGGAAAT
GGAAGCCAACTTTAACCAGCAGCTACAACAGTTGCCAAAAGAAACCGAAATTCCAGGTCTGGTTGAAGATGTCAACGTTA
CGGGTGTGAATTCAGGCTTAAGATTTAAAAATATCCGTCTGGAAAATGAAATCAAGCAAGAGTTCTTTATCGAGCAGCCA
ATTTCGATTGAAGCCACCGGTGATTATCATGCTTTTGGTTCTTTTGTGAGCGGTACAGCCGCTTTACCGCGAATTGTGAC
CATGCATGATTTCACTATTACTGCCGGTGAAAACAAGGAAAAGAAAACCGATATTCCACAAATTACCTATGTCGCGAAAG
CCAAGACCTATCGCTATGTCGGGAATACCGATGCACAGGCAGGGAATAGCACGACTCCAGCCACAGGAGCAGCACAATGA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilO (PilO)

(74-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9KYM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilO Acinetobacter baumannii D1279779

69.748

99.582

0.695
  comO Acinetobacter baylyi ADP1

67.213

100

0.686

Multiple sequence alignment