Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilP   Type   Machinery gene
Locus tag   MOW14_RS12765 Genome accession   NZ_CP094258
Coordinates   2662244..2662771 (-) Length   175 a.a.
NCBI ID   WP_104489345.1    Uniprot ID   -
Organism   Acinetobacter indicus strain BDT201     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2657244..2667771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW14_RS12745 (MOW14_12745) - 2657509..2658345 (-) 837 WP_104483915.1 hypothetical protein -
  MOW14_RS12750 (MOW14_12750) aroB 2658358..2659440 (-) 1083 WP_075167859.1 3-dehydroquinate synthase -
  MOW14_RS12755 (MOW14_12755) aroK 2659463..2660005 (-) 543 WP_075167858.1 shikimate kinase AroK -
  MOW14_RS12760 (MOW14_12760) pilQ 2660042..2662183 (-) 2142 WP_180006629.1 type IV pilus secretin PilQ family protein Machinery gene
  MOW14_RS12765 (MOW14_12765) pilP 2662244..2662771 (-) 528 WP_104489345.1 pilus assembly protein PilP Machinery gene
  MOW14_RS12770 (MOW14_12770) pilO 2662771..2663490 (-) 720 WP_005180513.1 type 4a pilus biogenesis protein PilO Machinery gene
  MOW14_RS12775 (MOW14_12775) pilN 2663487..2664122 (-) 636 WP_005180516.1 PilN domain-containing protein Machinery gene
  MOW14_RS12780 (MOW14_12780) pilM 2664122..2665180 (-) 1059 WP_104505685.1 pilus assembly protein PilM Machinery gene

Sequence


Protein


Download         Length: 175 a.a.        Molecular weight: 19272.46 Da        Isoelectric Point: 7.1666

>NTDB_id=668439 MOW14_RS12765 WP_104489345.1 2662244..2662771(-) (pilP) [Acinetobacter indicus strain BDT201]
MKFEKLSLVLVLGLLAAGCDSRIDAVNTQMAEIRNQPPLPIEPAPTFEPAPVFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRGEILALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=668439 MOW14_RS12765 WP_104489345.1 2662244..2662771(-) (pilP) [Acinetobacter indicus strain BDT201]
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGCTGTGATTCACGTATTGATGCCGTGAA
TACACAAATGGCAGAAATCCGTAATCAGCCGCCGTTACCGATTGAACCGGCACCGACTTTTGAGCCGGCACCTGTATTTA
ACTATGCAGCACATCAGCTGAAAAGCCCGTTTATGCCAAGTTCTCTGGCGGCCGAGCTGAAAATTATGGCGGGTAAACGG
GTTTATCCAAACCTGTCGCGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTAAGTATGAAAGGCAGCATGCG
CGGGCAACGCGGCGAGATTCTGGCCCTGATTCAAACTCCAGATGGTGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATCAATATTACGCCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGTCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA

Domains


Predicted by InterproScan.

(28-170)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

75.429

100

0.754

  comL Acinetobacter baylyi ADP1

71.856

95.429

0.686


Multiple sequence alignment