Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilN   Type   Machinery gene
Locus tag   MOW14_RS12775 Genome accession   NZ_CP094258
Coordinates   2663487..2664122 (-) Length   211 a.a.
NCBI ID   WP_005180516.1    Uniprot ID   N9MGL9
Organism   Acinetobacter indicus strain BDT201     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2658487..2669122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW14_RS12755 (MOW14_12755) aroK 2659463..2660005 (-) 543 WP_075167858.1 shikimate kinase AroK -
  MOW14_RS12760 (MOW14_12760) pilQ 2660042..2662183 (-) 2142 WP_180006629.1 type IV pilus secretin PilQ family protein Machinery gene
  MOW14_RS12765 (MOW14_12765) pilP 2662244..2662771 (-) 528 WP_104489345.1 pilus assembly protein PilP Machinery gene
  MOW14_RS12770 (MOW14_12770) pilO 2662771..2663490 (-) 720 WP_005180513.1 type 4a pilus biogenesis protein PilO Machinery gene
  MOW14_RS12775 (MOW14_12775) pilN 2663487..2664122 (-) 636 WP_005180516.1 PilN domain-containing protein Machinery gene
  MOW14_RS12780 (MOW14_12780) pilM 2664122..2665180 (-) 1059 WP_104505685.1 pilus assembly protein PilM Machinery gene
  MOW14_RS12785 (MOW14_12785) ponA 2665351..2667927 (+) 2577 WP_180006566.1 penicillin-binding protein PBP1a -
  MOW14_RS12790 (MOW14_12790) - 2667977..2668780 (-) 804 WP_180006565.1 putative RNA methyltransferase -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23494.92 Da        Isoelectric Point: 7.9757

>NTDB_id=668441 MOW14_RS12775 WP_005180516.1 2663487..2664122(-) (pilN) [Acinetobacter indicus strain BDT201]
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ

Nucleotide


Download         Length: 636 bp        

>NTDB_id=668441 MOW14_RS12775 WP_005180516.1 2663487..2664122(-) (pilN) [Acinetobacter indicus strain BDT201]
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTCACGTTGGCATGGTTCTATTACAACCATAAACTGCAGGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAATCAGAATCTGGATGTACAGTTAAAGTCGCTGGAAGGCCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGTATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCACCATGGTATCGCAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA

Domains


Predicted by InterproScan.

(100-166)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9MGL9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilN Acinetobacter baumannii D1279779

71.09

100

0.711

  comN Acinetobacter baylyi ADP1

70.616

100

0.706


Multiple sequence alignment