Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   MOW14_RS00845 Genome accession   NZ_CP094258
Coordinates   177015..178157 (-) Length   380 a.a.
NCBI ID   WP_005181456.1    Uniprot ID   A0A7V8P956
Organism   Acinetobacter indicus strain BDT201     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 172015..183157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW14_RS00815 (MOW14_00815) - 172332..173330 (-) 999 WP_168370300.1 pirin family protein -
  MOW14_RS00820 (MOW14_00820) - 173451..174059 (-) 609 Protein_157 hypothetical protein -
  MOW14_RS00825 (MOW14_00825) - 174242..174784 (-) 543 WP_005181445.1 glutathione peroxidase -
  MOW14_RS00830 (MOW14_00830) - 175113..176024 (+) 912 WP_005181447.1 DMT family transporter -
  MOW14_RS00835 (MOW14_00835) - 176095..176247 (-) 153 WP_228152267.1 hypothetical protein -
  MOW14_RS00840 (MOW14_00840) - 176404..176970 (-) 567 WP_005181449.1 Sua5/YciO/YrdC/YwlC family protein -
  MOW14_RS00845 (MOW14_00845) dprA 177015..178157 (-) 1143 WP_005181456.1 DNA-processing protein DprA Machinery gene
  MOW14_RS00850 (MOW14_00850) tsaP 178174..179331 (-) 1158 WP_016658990.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  MOW14_RS00855 (MOW14_00855) def 179451..179975 (+) 525 WP_005181462.1 peptide deformylase -
  MOW14_RS00860 (MOW14_00860) - 180066..180488 (+) 423 WP_016658991.1 DUF2946 family protein -
  MOW14_RS00865 (MOW14_00865) - 180562..182592 (+) 2031 WP_168370301.1 TonB-dependent copper receptor -

Sequence


Protein


Download         Length: 380 a.a.        Molecular weight: 42136.98 Da        Isoelectric Point: 6.9756

>NTDB_id=668406 MOW14_RS00845 WP_005181456.1 177015..178157(-) (dprA) [Acinetobacter indicus strain BDT201]
MLNTISPGHLATIRLWYLVQHSLPSFYKLIRHFGSAAAATEAGNLQRWAELGLHQNHLQRARDFHQAQAQADFQHLLQRV
QQHTDFILIPEDVGYPTQLLPYTDKPPILFGQGQAQPLLQPQVAIVGSRKASPHGRQVAYDFAYYLSEKGFFINSGLAQG
IDEAAHQGGLKHQRTIAVMGTGLDLTYPATHQGLRDQILQRHGTIISEFLPQTKPLQQHFPRRNRIVSGLSLGVIVAEAT
LDSGSLITAKLAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQVIEDLALPTQWLSQQQATLSATASAAAHPT
LPEHLLALYSQLDWVGKNMDQLASELQQETAHLTAQLMELELLGMAMQQSGLYLRCRPSQ

Nucleotide


Download         Length: 1143 bp        

>NTDB_id=668406 MOW14_RS00845 WP_005181456.1 177015..178157(-) (dprA) [Acinetobacter indicus strain BDT201]
ATGCTGAATACGATATCACCCGGTCATCTCGCAACGATTCGCCTGTGGTATCTGGTTCAGCATTCACTCCCCAGCTTTTA
TAAATTAATCCGGCACTTCGGTTCGGCCGCTGCGGCCACCGAAGCCGGCAACCTGCAGCGCTGGGCAGAACTGGGACTGC
ATCAGAACCATCTGCAACGCGCACGGGATTTTCATCAAGCACAGGCACAAGCCGACTTCCAGCACTTGCTGCAGCGCGTC
CAGCAACATACCGATTTTATTCTTATTCCCGAAGATGTCGGTTACCCCACCCAACTGCTGCCCTATACCGACAAGCCACC
AATTTTATTTGGCCAAGGACAGGCACAACCTTTACTTCAGCCGCAAGTGGCAATTGTCGGCAGTCGCAAAGCCAGTCCGC
ATGGCCGGCAGGTGGCTTATGACTTTGCCTATTATTTAAGTGAAAAAGGCTTTTTTATTAACAGTGGCCTGGCGCAAGGC
ATTGATGAAGCAGCCCATCAGGGTGGCTTGAAACATCAACGTACCATTGCCGTGATGGGTACTGGTCTCGACCTCACCTA
CCCAGCCACACATCAGGGCCTGCGTGACCAGATTCTGCAACGGCATGGCACTATTATCAGTGAGTTCCTGCCCCAGACTA
AACCGCTACAGCAGCATTTTCCACGGCGCAACCGCATTGTCAGTGGACTTAGCCTGGGAGTAATTGTGGCCGAAGCCACG
CTGGACAGTGGCTCGCTGATTACCGCCAAACTGGCAGCTGAACAGGGCAAAACCGTGTTTGCCATTCCCGGTCATATCTA
CAGTGAATTTCATCAGGGCTGCCATCAACTGATTCGGGAAGGTGCAATTCTGGTCGATCATCCGGAACAGGTCATTGAAG
ATCTGGCCTTGCCAACCCAATGGCTGAGCCAGCAGCAGGCGACCTTATCCGCTACAGCATCTGCAGCTGCCCACCCGACC
TTACCCGAACATCTGTTGGCCCTATACAGCCAGCTGGACTGGGTCGGTAAAAATATGGACCAGCTGGCCAGCGAACTGCA
ACAGGAAACCGCCCATTTAACCGCTCAGTTAATGGAACTGGAGCTGCTCGGGATGGCAATGCAGCAATCGGGGCTATATC
TGCGTTGTCGTCCATCGCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7V8P956

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

69.761

99.211

0.692

  dprA Acinetobacter baumannii D1279779

69.496

99.211

0.689

  dprA Acinetobacter baylyi ADP1

64.211

100

0.642

  dprA Vibrio cholerae strain A1552

42.857

88.421

0.379


Multiple sequence alignment