Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   MOW12_RS00990 Genome accession   NZ_CP094254
Coordinates   205259..206401 (-) Length   380 a.a.
NCBI ID   WP_005181456.1    Uniprot ID   A0A7V8P956
Organism   Acinetobacter indicus strain BDT2076     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 200259..211401
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW12_RS00965 (MOW12_00965) - 200575..201573 (-) 999 WP_127800666.1 pirin family protein -
  MOW12_RS00970 (MOW12_00970) - 201694..202302 (-) 609 WP_127800678.1 hypothetical protein -
  MOW12_RS00975 (MOW12_00975) - 202485..203027 (-) 543 WP_005181445.1 glutathione peroxidase -
  MOW12_RS00980 (MOW12_00980) - 203356..204267 (+) 912 WP_242911889.1 DMT family transporter -
  MOW12_RS00985 (MOW12_00985) - 204648..205214 (-) 567 WP_005181449.1 Sua5/YciO/YrdC/YwlC family protein -
  MOW12_RS00990 (MOW12_00990) dprA 205259..206401 (-) 1143 WP_005181456.1 DNA-processing protein DprA Machinery gene
  MOW12_RS00995 (MOW12_00995) tsaP 206418..207575 (-) 1158 WP_016658990.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  MOW12_RS01000 (MOW12_01000) def 207695..208219 (+) 525 WP_005181462.1 peptide deformylase -
  MOW12_RS01005 (MOW12_01005) - 208310..208732 (+) 423 WP_016658991.1 DUF2946 family protein -
  MOW12_RS01010 (MOW12_01010) - 208806..210857 (+) 2052 WP_104503910.1 TonB-dependent copper receptor -

Sequence


Protein


Download         Length: 380 a.a.        Molecular weight: 42136.98 Da        Isoelectric Point: 6.9756

>NTDB_id=668369 MOW12_RS00990 WP_005181456.1 205259..206401(-) (dprA) [Acinetobacter indicus strain BDT2076]
MLNTISPGHLATIRLWYLVQHSLPSFYKLIRHFGSAAAATEAGNLQRWAELGLHQNHLQRARDFHQAQAQADFQHLLQRV
QQHTDFILIPEDVGYPTQLLPYTDKPPILFGQGQAQPLLQPQVAIVGSRKASPHGRQVAYDFAYYLSEKGFFINSGLAQG
IDEAAHQGGLKHQRTIAVMGTGLDLTYPATHQGLRDQILQRHGTIISEFLPQTKPLQQHFPRRNRIVSGLSLGVIVAEAT
LDSGSLITAKLAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQVIEDLALPTQWLSQQQATLSATASAAAHPT
LPEHLLALYSQLDWVGKNMDQLASELQQETAHLTAQLMELELLGMAMQQSGLYLRCRPSQ

Nucleotide


Download         Length: 1143 bp        

>NTDB_id=668369 MOW12_RS00990 WP_005181456.1 205259..206401(-) (dprA) [Acinetobacter indicus strain BDT2076]
ATGCTGAATACGATATCACCCGGTCATCTCGCAACGATTCGCCTGTGGTATCTGGTTCAGCATTCACTCCCCAGCTTTTA
TAAATTAATTCGGCACTTCGGTTCGGCCGCTGCGGCCACCGAAGCCGGCAACCTGCAGCGCTGGGCAGAACTGGGACTGC
ATCAGAACCATCTGCAACGCGCACGGGATTTTCATCAAGCACAGGCACAAGCCGACTTCCAGCACTTGCTGCAGCGCGTC
CAGCAACATACCGATTTTATTCTTATTCCCGAAGATGTCGGTTACCCCACCCAACTGCTGCCCTATACCGACAAGCCACC
AATTTTATTTGGCCAAGGACAGGCACAACCTTTACTTCAGCCGCAAGTGGCAATTGTCGGCAGTCGCAAAGCCAGTCCGC
ATGGCCGGCAGGTGGCTTATGACTTTGCCTATTATTTAAGTGAAAAAGGCTTTTTTATTAACAGTGGCCTGGCGCAAGGC
ATTGATGAAGCAGCCCATCAGGGTGGCTTGAAACATCAACGTACCATTGCCGTGATGGGTACTGGTCTCGACCTCACCTA
CCCGGCCACACACCAGGGTCTGCGTGACCAGATTCTGCAACGGCATGGCACTATTATCAGTGAGTTCCTGCCACAGACCA
AACCGCTACAGCAGCATTTTCCACGGCGTAACCGCATTGTCAGTGGACTTAGCCTGGGAGTGATTGTAGCCGAAGCCACG
CTGGACAGCGGCTCGCTGATTACCGCCAAACTGGCGGCCGAGCAAGGTAAAACCGTGTTTGCCATTCCGGGACATATTTA
CAGTGAATTTCATCAGGGCTGCCATCAACTGATTCGGGAAGGCGCGATTCTGGTCGATCATCCGGAACAGGTCATTGAAG
ATCTGGCCTTGCCAACCCAATGGCTGAGCCAGCAGCAGGCGACCTTATCCGCTACAGCATCTGCAGCTGCCCACCCGACC
TTACCCGAACATCTGTTGGCCCTATACAGCCAGCTGGACTGGGTCGGTAAAAATATGGACCAGCTGGCCAGCGAACTGCA
ACAGGAAACCGCCCATTTAACCGCGCAGTTAATGGAACTGGAGCTGCTCGGGATGGCGATGCAGCAATCGGGGCTATATC
TGCGTTGTCGTCCATCACAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7V8P956

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

69.761

99.211

0.692

  dprA Acinetobacter baumannii D1279779

69.496

99.211

0.689

  dprA Acinetobacter baylyi ADP1

64.211

100

0.642

  dprA Vibrio cholerae strain A1552

42.857

88.421

0.379


Multiple sequence alignment