Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   MOW12_RS00995 Genome accession   NZ_CP094254
Coordinates   206418..207575 (-) Length   385 a.a.
NCBI ID   WP_016658990.1    Uniprot ID   V2UEN4
Organism   Acinetobacter indicus strain BDT2076     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 201418..212575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW12_RS00970 (MOW12_00970) - 201694..202302 (-) 609 WP_127800678.1 hypothetical protein -
  MOW12_RS00975 (MOW12_00975) - 202485..203027 (-) 543 WP_005181445.1 glutathione peroxidase -
  MOW12_RS00980 (MOW12_00980) - 203356..204267 (+) 912 WP_242911889.1 DMT family transporter -
  MOW12_RS00985 (MOW12_00985) - 204648..205214 (-) 567 WP_005181449.1 Sua5/YciO/YrdC/YwlC family protein -
  MOW12_RS00990 (MOW12_00990) dprA 205259..206401 (-) 1143 WP_005181456.1 DNA-processing protein DprA Machinery gene
  MOW12_RS00995 (MOW12_00995) tsaP 206418..207575 (-) 1158 WP_016658990.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  MOW12_RS01000 (MOW12_01000) def 207695..208219 (+) 525 WP_005181462.1 peptide deformylase -
  MOW12_RS01005 (MOW12_01005) - 208310..208732 (+) 423 WP_016658991.1 DUF2946 family protein -
  MOW12_RS01010 (MOW12_01010) - 208806..210857 (+) 2052 WP_104503910.1 TonB-dependent copper receptor -
  MOW12_RS01015 (MOW12_01015) - 210992..212143 (+) 1152 WP_242911890.1 IS4-like element ISAbe18 family transposase -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 42521.54 Da        Isoelectric Point: 8.8330

>NTDB_id=668370 MOW12_RS00995 WP_016658990.1 206418..207575(-) (tsaP) [Acinetobacter indicus strain BDT2076]
MKKVLKGTSSFRALGLKQQALALAVCFSFGVGAVSTVQAAPARNINPPTLQANAPNVYVVKKGDTLWDISKKFLQNPLRW
REIWASNKHVKNPHWIFPGDRLLMCTYDGRPIIGKDEGDGCEGIIRRYTGNTTSLQPQIRVESLNNTIPVIPLEYIQHWL
ERTSIIAPESLQQTPYILGTADQRVLAAKGQNVYARGQGLQVGQRYAVYREGEPYIFTDANGKKYNAGLELTQVASGIAV
RGENDITTLELTDTYNAEVRRGDRVLPEYDPMLPTLFYPTNAEHIAADGQVVRVMGSIGTAAKHSVVTIDRGQAHGVQSG
HVFAVTQKGEVVTDPKTRERVQLPGERIGYAMVFKTFDQLSYAYILDSELPIKVGAGIQPPIMED

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=668370 MOW12_RS00995 WP_016658990.1 206418..207575(-) (tsaP) [Acinetobacter indicus strain BDT2076]
ATGAAAAAGGTTTTGAAGGGCACATCTTCTTTTCGTGCCTTGGGGTTAAAACAGCAGGCGCTGGCACTTGCGGTCTGTTT
CAGTTTTGGGGTGGGCGCAGTCAGTACTGTACAGGCCGCACCGGCACGCAATATCAACCCACCGACCTTACAGGCCAATG
CACCAAATGTGTATGTGGTGAAAAAAGGCGATACGCTGTGGGATATTTCCAAGAAGTTTCTGCAAAACCCGCTGCGCTGG
CGTGAAATCTGGGCCAGCAACAAGCACGTGAAAAATCCGCACTGGATTTTCCCGGGAGATCGCCTGCTGATGTGTACCTA
TGATGGCCGCCCGATCATTGGTAAAGATGAAGGTGATGGCTGTGAAGGTATTATCCGTCGTTATACGGGTAACACCACCA
GCCTGCAGCCGCAAATCCGGGTCGAGTCACTCAACAATACCATTCCGGTGATTCCACTGGAGTACATCCAGCACTGGCTG
GAACGCACCAGCATTATTGCCCCTGAATCTTTGCAACAGACGCCTTATATTTTAGGCACGGCGGATCAGCGTGTATTGGC
GGCTAAAGGCCAGAATGTCTATGCCCGCGGTCAGGGTCTGCAAGTTGGCCAGCGTTATGCCGTGTATCGTGAAGGCGAAC
CGTATATCTTCACCGATGCCAACGGTAAAAAATACAATGCCGGTCTGGAGCTGACTCAGGTTGCATCCGGTATTGCAGTA
CGCGGTGAAAATGACATTACTACCCTGGAACTGACCGACACCTACAATGCCGAAGTGCGTCGTGGTGATCGTGTGCTGCC
AGAATATGACCCGATGTTACCGACCCTGTTCTATCCGACCAATGCCGAACATATTGCAGCGGATGGCCAGGTGGTACGTG
TGATGGGGTCAATTGGGACCGCGGCTAAACACAGTGTGGTCACCATTGACCGTGGTCAGGCGCACGGCGTGCAATCCGGT
CATGTATTTGCTGTAACTCAAAAAGGCGAAGTGGTCACCGATCCGAAAACCCGTGAACGGGTGCAGCTGCCAGGCGAGCG
TATTGGCTATGCCATGGTCTTTAAAACCTTTGACCAGCTCAGCTATGCCTATATTCTGGACAGCGAACTACCAATTAAAG
TCGGGGCCGGTATTCAGCCACCGATTATGGAAGATTAA

Domains


Predicted by InterproScan.

(58-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB V2UEN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

66.234

100

0.662


Multiple sequence alignment