Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   MON37_RS00305 Genome accession   NZ_CP094242
Coordinates   69524..70744 (+) Length   406 a.a.
NCBI ID   WP_039409379.1    Uniprot ID   A0A0C1GIS1
Organism   Morococcus cerebrosus strain CIP 81.93     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 64524..75744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON37_RS00290 (MON37_00290) - 65150..65743 (+) 594 WP_003742625.1 DUF4390 domain-containing protein -
  MON37_RS00295 (MON37_00295) - 65747..67870 (+) 2124 WP_039409376.1 PAS domain-containing sensor histidine kinase -
  MON37_RS00300 (MON37_00300) - 67863..69146 (+) 1284 WP_003763191.1 sigma-54 dependent transcriptional regulator -
  MON37_RS00305 (MON37_00305) dprA 69524..70744 (+) 1221 WP_039409379.1 DNA-processing protein DprA Machinery gene
  MON37_RS00310 (MON37_00310) - 70770..71225 (+) 456 WP_003742632.1 DUF494 family protein -
  MON37_RS00315 (MON37_00315) topA 71310..73616 (+) 2307 WP_039409382.1 type I DNA topoisomerase -
  MON37_RS00320 (MON37_00320) - 73755..74720 (+) 966 WP_242883583.1 IS30 family transposase -
  MON37_RS00325 (MON37_00325) - 74775..74996 (-) 222 WP_003742639.1 hypothetical protein -

Sequence


Protein


Download         Length: 406 a.a.        Molecular weight: 43803.04 Da        Isoelectric Point: 6.4180

>NTDB_id=668330 MON37_RS00305 WP_039409379.1 69524..70744(+) (dprA) [Morococcus cerebrosus strain CIP 81.93]
MTENDRLAWLQLAFTPYVGAEGFLLLLQRFGSAKAALDAPAEQIATIVRHKQAAESWRNGEKRALAQKAAEAALQWEKQD
GCRLLLLQDDDFPEMLTQGITAPPVLFLRGNVQLLHKPSAAIVGSRHATPQAMRIAKDFGRALSEQDIPVVSGMASGIDT
AAHQGALQAGGDTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPLDTRPFAGNFPRRNRLIAALSQVTLVVEAALES
GSLITAKLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLVECLDDILHECPGLLQNAAVPSYSINKKNKKTEKRTAVR
ETSSEPVLPFSDDLHVRKQPAQANTVAAPTAEDGLLDAMGYDSVHPDILAQQTAWAAADVYARLLEYELDGIVAALPGGR
YQRIKA

Nucleotide


Download         Length: 1221 bp        

>NTDB_id=668330 MON37_RS00305 WP_039409379.1 69524..70744(+) (dprA) [Morococcus cerebrosus strain CIP 81.93]
ATGACGGAAAACGACCGCCTTGCCTGGCTGCAACTGGCGTTTACGCCTTATGTCGGCGCGGAGGGCTTCTTGCTCCTACT
ACAACGTTTCGGCAGCGCGAAAGCCGCGCTGGATGCTCCTGCGGAGCAAATCGCCACGATAGTGCGCCACAAGCAGGCAG
CCGAATCTTGGCGCAACGGCGAAAAACGGGCGTTGGCGCAAAAGGCTGCGGAAGCGGCGCTGCAATGGGAAAAGCAGGAC
GGCTGCCGTTTGTTGCTGCTGCAAGATGATGATTTTCCTGAAATGCTGACGCAGGGCATTACCGCGCCGCCGGTTTTGTT
CTTGCGCGGTAACGTGCAACTGCTGCACAAACCTTCCGCCGCCATTGTCGGCAGCCGCCATGCCACGCCGCAGGCGATGC
GGATTGCCAAAGATTTCGGCAGAGCGTTGAGTGAACAGGATATTCCCGTCGTGTCGGGTATGGCTTCGGGTATCGACACC
GCCGCCCACCAAGGCGCATTGCAGGCGGGCGGCGACACCATCGCCGTATGGGGGACGGGCATAGACCGCATTTACCCGCC
GTCCAATAAAAACCTTGCCTATGAAATCGCCGAAAAAGGATTGATTGTCAGCGAGTTTCCTTTGGATACGCGGCCGTTTG
CGGGCAACTTTCCGCGCCGCAACCGCCTGATCGCCGCGTTGTCGCAGGTTACGCTGGTGGTCGAGGCCGCGTTGGAATCC
GGTTCGCTGATTACTGCCAAGCTGGCGGCGGAGATGGGACGTGAGGTGATGGCGGTGCCCGGTTCGATAGACAATCCGCA
CAGTAAGGGCTGCCACAAGCTGATTAAAGACGGCGCGAAATTGGTGGAATGTTTGGACGACATCCTTCACGAATGTCCGG
GGCTATTGCAAAATGCGGCAGTTCCATCATATTCTATAAATAAGAAAAACAAAAAAACGGAAAAACGCACTGCCGTCAGA
GAGACGTCGTCTGAACCTGTTTTACCGTTTTCAGACGACCTTCATGTCCGAAAACAGCCGGCGCAAGCCAATACGGTTGC
CGCGCCGACAGCGGAAGATGGGCTGCTGGACGCCATGGGTTACGACTCCGTTCATCCCGATATATTGGCGCAGCAAACCG
CATGGGCGGCGGCAGACGTTTACGCTCGACTGCTGGAATACGAACTCGACGGCATCGTCGCCGCCTTGCCGGGCGGACGC
TATCAGCGCATAAAAGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0C1GIS1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Neisseria meningitidis strain C311

77.34

100

0.773

  dprA Neisseria meningitidis MC58

77.34

100

0.773

  dprA Neisseria gonorrhoeae strain FA1090

75.062

99.754

0.749

  dprA Neisseria gonorrhoeae MS11

74.815

99.754

0.746

  dprA Vibrio cholerae strain A1552

37.624

99.507

0.374


Multiple sequence alignment