Detailed information NTG0665762

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: MOP87_RS20345
• Genome accession: NZ_CP093940
• Coordinates: 4529746..4531236 (+)
• Length: 496 a.a.
• NCBI ID: WP_242809936.1
• Uniprot ID: -
• Organism: Pseudomonas sp. I3-I5
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 4524746..4536236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MOP87_RS20325 (MOP87_20325)	-	4525130..4526461 (-)	1332	WP_023532646.1	ammonium transporter	-
MOP87_RS20330 (MOP87_20330)	glnK	4526509..4526847 (-)	339	WP_002555808.1	P-II family nitrogen regulator	-
MOP87_RS20335 (MOP87_20335)	-	4527211..4527468 (+)	258	WP_027913405.1	accessory factor UbiK family protein	-
MOP87_RS20340 (MOP87_20340)	-	4527504..4529513 (-)	2010	WP_110606422.1	DUF4034 domain-containing protein	-
MOP87_RS20345 (MOP87_20345)	comM	4529746..4531236 (+)	1491	WP_242809936.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
MOP87_RS20350 (MOP87_20350)	-	4531449..4531916 (+)	468	WP_242809937.1	helix-turn-helix domain-containing protein	-
MOP87_RS20355 (MOP87_20355)	-	4531913..4532488 (+)	576	WP_242809938.1	PIN domain-containing protein	-
MOP87_RS20360 (MOP87_20360)	-	4532669..4533445 (+)	777	WP_027913400.1	alpha/beta hydrolase	-
MOP87_RS20365 (MOP87_20365)	-	4533445..4534242 (+)	798	WP_028686766.1	SDR family oxidoreductase	-
MOP87_RS20370 (MOP87_20370)	-	4534371..4535282 (+)	912	WP_110606350.1	LysR substrate-binding domain-containing protein	-

Sequence

Protein

• Length: 496 a.a.
• Molecular weight: 52605.35 Da
• Isoelectric Point: 7.6868

>NTDB_id=665762 MOP87_RS20345 WP_242809936.1 4529746..4531236(+) (comM) [Pseudomonas sp. I3-I5]
MSLALVHSRAQVGVQAPAVSVETHLANGLPHLTLVGLPETTVKESKDRVRSAIVNSGLNYPARRITQNLAPADLPKDGGR
YDLAIALGILAADAQVPVATLAELECLGELALSGALRPVQGVLPAALAARQAGRALVVPRENAEEASLASGLVVYAVGHL
LELVAHLNGQVPLAAYAANGLLLNPCPYPDLSEVQGQLAAKRALLLAAAGAHNLLFTGPPGTGKTLLASRLPGLLPPLDE
HEALEVAAIQSVSGHTPLNSWPQRPFRHPHHSASGPALVGGGSRPQPGEITLAHHGVLFLDELPEFERRVLEVLREPLES
GEIVIARARDKVRFPARFQLVAAMNPCPCGYLGDPTGRCRCSTEQISRYRNKLSGPLLDRIDLHLTVARESTTLNNQPCG
QSSADVALQVAHAREVQQRRQGCANAFLNLDGLRQHCSLAAPDQAWLEGACERLTLSLRAAHRLLKVARTLADLEGCTAI
GRAHLAEALQYRPGSG

Nucleotide

• Length: 1491 bp

>NTDB_id=665762 MOP87_RS20345 WP_242809936.1 4529746..4531236(+) (comM) [Pseudomonas sp. I3-I5]
ATGTCTTTAGCCCTTGTTCACAGCCGCGCCCAGGTAGGCGTGCAGGCCCCGGCCGTCAGCGTTGAAACCCACCTGGCCAA
TGGCTTGCCTCATCTCACACTGGTCGGCTTGCCCGAAACCACGGTCAAGGAAAGCAAGGACCGCGTGCGCAGTGCCATCG
TCAACAGTGGCCTGAACTACCCAGCCCGGCGCATCACGCAAAACCTCGCTCCGGCCGACCTGCCCAAGGACGGTGGCCGC
TACGACCTGGCCATCGCCCTGGGCATCCTGGCGGCCGATGCCCAGGTGCCCGTGGCCACCCTGGCCGAGCTCGAATGCCT
GGGCGAGCTGGCACTGTCGGGCGCGTTGCGGCCGGTACAGGGCGTCTTGCCCGCAGCGCTTGCCGCACGCCAGGCGGGGC
GGGCACTGGTAGTGCCCCGTGAAAATGCCGAGGAAGCCAGCCTTGCCAGTGGCCTGGTGGTGTATGCCGTAGGCCATCTA
TTGGAGCTGGTGGCCCACCTGAACGGACAGGTACCGCTAGCTGCCTATGCCGCCAATGGCTTGCTCCTGAACCCTTGCCC
CTATCCCGACCTGAGCGAGGTGCAGGGGCAACTGGCGGCCAAACGCGCGCTGCTACTGGCCGCTGCCGGGGCGCACAACC
TGCTTTTCACCGGGCCGCCAGGTACTGGCAAAACCTTGTTGGCCAGCCGCCTGCCGGGCCTGCTGCCACCGCTGGATGAG
CATGAAGCGCTGGAGGTCGCCGCCATCCAGTCGGTCAGCGGGCACACCCCGCTGAACAGCTGGCCACAACGGCCGTTTCG
CCACCCTCATCATTCCGCCTCCGGACCTGCGCTGGTGGGTGGCGGAAGCCGGCCGCAGCCCGGGGAAATCACCTTGGCCC
ACCACGGGGTGCTGTTTCTGGACGAGTTGCCCGAATTCGAGCGCCGGGTACTGGAAGTGCTGCGTGAACCCCTGGAATCT
GGCGAGATCGTAATCGCCAGGGCGCGGGATAAAGTGCGCTTTCCCGCCCGCTTTCAGCTCGTCGCTGCCATGAACCCCTG
CCCTTGCGGCTACCTGGGCGACCCTACAGGGCGATGCCGCTGCAGCACCGAGCAGATATCCCGTTATCGCAACAAACTGT
CAGGCCCGCTACTGGACCGGATCGACTTGCACCTGACCGTGGCGCGCGAGAGCACCACGCTCAACAACCAGCCTTGCGGG
CAAAGCAGCGCCGACGTCGCCCTTCAAGTCGCGCACGCCCGGGAGGTGCAACAACGTCGGCAAGGGTGCGCCAATGCATT
TCTCAACCTCGATGGCCTGCGCCAGCACTGTAGCTTGGCAGCACCTGATCAGGCTTGGTTGGAAGGCGCCTGTGAACGAT
TGACGTTGTCGCTGCGAGCAGCACACCGATTGCTCAAGGTCGCCAGAACACTGGCAGACCTCGAGGGATGCACGGCAATT
GGCCGGGCGCACCTGGCTGAGGCCCTGCAGTACCGTCCCGGGAGTGGTTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-391)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (401-492)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	55.8	100	0.563
comM	Vibrio campbellii strain DS40M4	55.444	100	0.554
comM	Vibrio cholerae strain A1552	55.354	99.798	0.552
comM	Glaesserella parasuis strain SC1401	53.8	100	0.542
comM	Legionella pneumophila str. Paris	49.899	100	0.5
comM	Legionella pneumophila strain ERS1305867	49.899	100	0.5
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.521	100	0.472