Detailed information NTG0663729

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: MNO08_RS27185
• Genome accession: NZ_CP093333
• Coordinates: 5871589..5873085 (+)
• Length: 498 a.a.
• NCBI ID: WP_042570933.1
• Uniprot ID: -
• Organism: Pseudomonas simiae strain H4-B59
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5866589..5878085

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MNO08_RS27155 (MNO08_27155)	sutA	5866736..5867062 (-)	327	WP_010207457.1	transcriptional regulator SutA	-
MNO08_RS27160 (MNO08_27160)	-	5867166..5867591 (-)	426	WP_010207458.1	secondary thiamine-phosphate synthase enzyme YjbQ	-
MNO08_RS27165 (MNO08_27165)	-	5867803..5869140 (-)	1338	WP_010207459.1	ammonium transporter	-
MNO08_RS27170 (MNO08_27170)	glnK	5869175..5869513 (-)	339	WP_002555808.1	P-II family nitrogen regulator	-
MNO08_RS27175 (MNO08_27175)	-	5869936..5870196 (+)	261	WP_010207460.1	accessory factor UbiK family protein	-
MNO08_RS27180 (MNO08_27180)	-	5870223..5871494 (+)	1272	WP_021492607.1	MFS transporter	-
MNO08_RS27185 (MNO08_27185)	comM	5871589..5873085 (+)	1497	WP_042570933.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
MNO08_RS27190 (MNO08_27190)	-	5873082..5873666 (-)	585	WP_044288170.1	TetR family transcriptional regulator C-terminal domain-containing protein	-
MNO08_RS27195 (MNO08_27195)	-	5873778..5874692 (+)	915	WP_176331943.1	ABC transporter six-transmembrane domain-containing protein	-
MNO08_RS27200 (MNO08_27200)	-	5874696..5876672 (-)	1977	WP_010207466.1	methyl-accepting chemotaxis protein	-
MNO08_RS27205 (MNO08_27205)	-	5876850..5877770 (-)	921	WP_010207468.1	LysR substrate-binding domain-containing protein	-

Sequence

Protein

• Length: 498 a.a.
• Molecular weight: 53417.60 Da
• Isoelectric Point: 8.2079

>NTDB_id=663729 MNO08_RS27185 WP_042570933.1 5871589..5873085(+) (comM) [Pseudomonas simiae strain H4-B59]
MSLAIVHSRAQIGVEAPAVTVEVHMANGLPSLTLVGLPETAVKESKDRVRSAILNSALQYPARRITLNLAPADLPKDGGR
FDLAIALGILAASVQVPASMLDEVECLGELALSGEVRAVKGVLPAALAARKAGRTVIVPRANAEEACLASGLKVLAVDHL
LQVVAHLNGHQPIEPYKSDGLLYLNKPYPDLSEVQGQLAAKRALLIAAAGAHNLLLSGPPGTGKTLLASRLPGLLPPLSE
QEALEVAAIQSVVSVAPLSHWPHRPFRQPHHSASGPALVGGGSKPQPGEITLAHHGVLFLDELPEFDRKVLEVLREPLES
GHIVISRARDRVSFPARFQLVAAMNPCPCGYLGEPSGRCRCTPEQIQRYRNKLSGPLLDRIDLHLTVARETTALNPTQQA
GDNTAEASARVAQARDRQQQRQGCANAFLDLPELRKHCKLAKVDECWLENACERLTLSLRAAHRLLKVARTLADLEHTDS
INRAHLAEALQYRPAAVG

Nucleotide

• Length: 1497 bp

>NTDB_id=663729 MNO08_RS27185 WP_042570933.1 5871589..5873085(+) (comM) [Pseudomonas simiae strain H4-B59]
ATGTCCCTCGCCATCGTCCACAGCCGTGCCCAAATTGGCGTCGAAGCTCCCGCCGTCACCGTCGAGGTGCACATGGCCAA
TGGTCTGCCGTCCCTGACACTGGTGGGTTTGCCGGAAACGGCGGTCAAGGAAAGCAAGGACCGGGTGCGCAGCGCCATTC
TCAATTCTGCCCTGCAATACCCGGCCCGCCGCATCACCCTGAACCTGGCACCTGCCGACCTGCCCAAGGACGGCGGGCGT
TTTGACCTGGCGATTGCCTTGGGAATCCTCGCGGCCAGCGTGCAGGTGCCGGCGTCGATGCTCGATGAGGTGGAATGCCT
GGGAGAATTGGCCCTGTCCGGCGAAGTGCGGGCAGTGAAAGGCGTGTTGCCGGCAGCATTGGCGGCGCGCAAGGCGGGGC
GCACCGTAATCGTGCCGCGGGCGAATGCGGAAGAAGCCTGCCTGGCGTCGGGGTTGAAAGTGCTCGCCGTGGATCATTTG
CTGCAGGTGGTAGCGCACCTGAATGGGCATCAGCCCATCGAGCCCTACAAATCCGACGGATTGCTGTATCTGAACAAACC
TTACCCGGACCTGAGCGAAGTACAGGGCCAGCTCGCCGCCAAGCGCGCACTGCTGATCGCGGCGGCGGGGGCGCATAACC
TGCTGTTAAGCGGCCCGCCCGGCACCGGCAAGACATTGCTCGCCAGTCGCCTACCGGGTTTGTTGCCACCGCTGAGTGAG
CAGGAAGCCCTGGAAGTGGCGGCGATTCAATCGGTCGTCAGCGTGGCGCCACTCAGTCATTGGCCCCACCGACCGTTTCG
CCAGCCGCATCATTCGGCGTCGGGCCCGGCGCTGGTGGGAGGCGGGTCAAAGCCGCAACCGGGAGAAATCACCCTGGCCC
ATCACGGCGTGCTGTTTCTGGATGAGCTGCCGGAGTTCGACCGCAAAGTATTGGAGGTGCTGCGCGAGCCACTGGAATCA
GGGCACATCGTGATTTCCCGTGCCCGCGACCGCGTGAGCTTCCCGGCCCGTTTCCAACTGGTCGCCGCCATGAACCCCTG
CCCTTGCGGGTACCTCGGCGAACCCAGCGGACGTTGTCGCTGTACGCCGGAGCAGATCCAGCGCTATCGCAACAAGCTCT
CCGGGCCGCTGCTGGACCGCATCGACTTGCACCTCACTGTGGCGCGAGAAACCACTGCGTTGAATCCTACCCAGCAGGCA
GGCGATAACACAGCCGAGGCGTCGGCACGGGTCGCCCAGGCCCGCGATCGCCAACAGCAACGCCAAGGCTGTGCGAATGC
TTTCCTTGATCTGCCGGAGCTACGCAAGCACTGCAAGCTGGCGAAGGTCGACGAATGCTGGCTGGAAAACGCCTGTGAAC
GGCTGACGCTTTCCCTGCGCGCAGCCCATCGACTGCTCAAAGTGGCACGCACCCTAGCCGACCTTGAGCACACCGATAGC
ATCAACCGGGCGCATCTGGCGGAAGCGTTGCAGTATCGGCCCGCGGCTGTTGGCTAG

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (190-391)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-493)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	56.97	99.398	0.566
comM	Glaesserella parasuis strain SC1401	56.287	100	0.566
comM	Vibrio cholerae strain A1552	56.162	99.398	0.558
comM	Haemophilus influenzae Rd KW20	55.2	100	0.554
comM	Legionella pneumophila str. Paris	50.806	99.598	0.506
comM	Legionella pneumophila strain ERS1305867	50.806	99.598	0.506
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.918	100	0.474