Detailed information NTG0662025

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: MKP10_RS02790
• Genome accession: NZ_CP093164
• Coordinates: 592362..593426 (+)
• Length: 354 a.a.
• NCBI ID: WP_045430802.1
• Uniprot ID: A0A365PW20
• Organism: Stutzerimonas zhaodongensis strain LQ01-5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 587362..598426

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKP10_RS02775 (MKP10_02775)	-	587403..588197 (+)	795	WP_241530019.1	thermonuclease family protein	-
MKP10_RS02780 (MKP10_02780)	-	588323..589591 (+)	1269	WP_045430808.1	malic enzyme-like NAD(P)-binding protein	-
MKP10_RS02785 (MKP10_02785)	-	589724..592177 (-)	2454	WP_241530020.1	penicillin-binding protein 1A	-
MKP10_RS02790 (MKP10_02790)	comM	592362..593426 (+)	1065	WP_045430802.1	pilus assembly protein PilM	Machinery gene
MKP10_RS02795 (MKP10_02795)	pilN	593426..593998 (+)	573	WP_045430800.1	type 4a pilus biogenesis protein PilN	-
MKP10_RS02800 (MKP10_02800)	pilO	593995..594618 (+)	624	WP_241530021.1	type 4a pilus biogenesis protein PilO	-
MKP10_RS02805 (MKP10_02805)	pilP	594615..595142 (+)	528	WP_241530022.1	type 4a pilus biogenesis lipoprotein PilP	-
MKP10_RS02810 (MKP10_02810)	pilQ	595194..597284 (+)	2091	WP_241530023.1	type IV pilus secretin PilQ	Machinery gene
MKP10_RS02815 (MKP10_02815)	aroK	597293..597838 (+)	546	WP_241530024.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37807.24 Da
• Isoelectric Point: 4.6397

>NTDB_id=662025 MKP10_RS02790 WP_045430802.1 592362..593426(+) (comM) [Stutzerimonas zhaodongensis strain LQ01-5]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGSRYRVESYAVEPLPPNAVVEKNIAELEGVGQALSRLLGKAKTGVKSAAV
AVSGSAVITKSIEMEAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRSPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLAPQLGAGHDELTVALVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSM
EEAGLAKKQGGLPDDFDSEVLQPFKEAVVQQVSRSLQFFFAAGQFHDVDYILLAGGTASIPGLDRLIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPSLMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=662025 MKP10_RS02790 WP_045430802.1 592362..593426(+) (comM) [Stutzerimonas zhaodongensis strain LQ01-5]
GTGCTAGGGCTATTCACTAAGAAAGCGAACACGCTGCTTGGGATCGACATCAGTTCGACGTCCGTCAAGCTACTGGAATT
AAGCCGCTCAGGTTCCCGGTATCGGGTTGAGTCCTATGCGGTTGAGCCACTCCCGCCAAATGCTGTGGTTGAAAAAAACA
TCGCTGAGCTGGAGGGCGTGGGGCAGGCGCTTTCCCGACTGTTAGGCAAGGCAAAAACTGGAGTCAAGTCGGCTGCTGTG
GCGGTATCTGGTTCGGCGGTCATCACTAAAAGCATCGAGATGGAAGCCGGGCTCAGCGACGAAGAGCTGGAAAACCAGTT
GAAGATCGAAGCTGACCAGTACATCCCCTATCCTCTCGAAGAGGTTGCCATCGACTTCGAGGTGCAGGGTCCTGCCCCTC
GTTCGCCTGGTCGGGTTGAAGTGTTACTGGCAGCGTGTCGCAAGGAAAACGTGGAAATACGGGAAGCGGCGCTCGCCTTG
GCGGGGCTGACTGCAAAGGTCGTTGATGTCGAAGCCTATGCGTTGGAGCGCTCCTATGGCTTGCTGGCGCCCCAGTTGGG
TGCCGGACATGACGAGCTGACCGTCGCGCTCGTCGACATCGGTGCGACCATGACCACGCTCAGCGTATTGCACAACGGCC
GTACTATTTATACGCGAGAACAACTGTTCGGTGGTCGTCAGCTCACCGAGGAAATACAACGGCGTTATGGGTTGTCAATG
GAAGAGGCAGGCCTGGCCAAGAAACAGGGAGGCCTCCCAGACGACTTCGACAGCGAAGTGTTGCAGCCGTTCAAGGAAGC
GGTCGTTCAACAGGTTTCGCGCTCTCTGCAGTTCTTCTTCGCTGCCGGGCAGTTCCACGATGTGGATTACATTCTTCTGG
CAGGCGGTACGGCATCTATCCCGGGGTTGGATCGGCTGATTCAGCAGAAAATCGGAACCCAGACTTTAGTCGCCAACCCG
TTCGCCGATATGGCATTGAGCAGCAAGGTCAACGCTGGCGCTCTCGCCAGTGATGCCCCGTCCCTGATGATCGCTTGTGG
GTTGGCCTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A365PW20

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	56.497	100	0.565
pilM	Acinetobacter baumannii D1279779	56.497	100	0.565
comM	Acinetobacter baylyi ADP1	54.52	100	0.545
pilM	Legionella pneumophila strain ERS1305867	47.175	100	0.472