Detailed information NTG0661967

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MMZ59_RS16310
• Genome accession: NZ_CP093150
• Coordinates: 3180599..3181285 (-)
• Length: 228 a.a.
• NCBI ID: WP_241511541.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain JYY-02
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3175599..3186285

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MMZ59_RS16275 (MMZ59_16275)	fliW	3175735..3176169 (-)	435	WP_007499985.1	flagellar assembly protein FliW	-
MMZ59_RS16280 (MMZ59_16280)	-	3176198..3176776 (-)	579	WP_008348255.1	DUF6470 family protein	-
MMZ59_RS16285 (MMZ59_16285)	flgL	3176823..3177734 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
MMZ59_RS16290 (MMZ59_16290)	flgK	3177743..3179263 (-)	1521	WP_008348259.1	flagellar hook-associated protein FlgK	-
MMZ59_RS16295 (MMZ59_16295)	-	3179279..3179761 (-)	483	WP_007499977.1	flagellar protein FlgN	-
MMZ59_RS16300 (MMZ59_16300)	flgM	3179780..3180043 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
MMZ59_RS16305 (MMZ59_16305)	-	3180123..3180542 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
MMZ59_RS16310 (MMZ59_16310)	comFC	3180599..3181285 (-)	687	WP_241511541.1	ComF family protein	Machinery gene
MMZ59_RS16315 (MMZ59_16315)	-	3181282..3181575 (-)	294	WP_017357862.1	late competence development ComFB family protein	-
MMZ59_RS16320 (MMZ59_16320)	comFA	3181640..3183019 (-)	1380	WP_138826871.1	DEAD/DEAH box helicase	Machinery gene
MMZ59_RS16325 (MMZ59_16325)	-	3183139..3183981 (-)	843	WP_007499966.1	DegV family protein	-
MMZ59_RS16330 (MMZ59_16330)	degU	3184193..3184882 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MMZ59_RS16335 (MMZ59_16335)	degS	3184947..3186122 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26155.70 Da
• Isoelectric Point: 10.2389

>NTDB_id=661967 MMZ59_RS16310 WP_241511541.1 3180599..3181285(-) (comFC) [Bacillus altitudinis strain JYY-02]
MICPICESHFVAAFTWESFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCHDCSRWNKRRDFAEILVMNRSVYA
YNDFMKDVLARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVN
QRKQSKKRKNERLHQQKLFQLRQANPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=661967 MMZ59_RS16310 WP_241511541.1 3180599..3181285(-) (comFC) [Bacillus altitudinis strain JYY-02]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGGAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTCATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCATGATTGTTCAAGGTGGAATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATGTTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTGCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTAAAT
CAAAGGAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAAGTTGTTTCAATTAAGGCAGGCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50	100	0.504
comFC/cflB	Streptococcus mitis SK321	38.428	100	0.386
comFC/cflB	Streptococcus mitis NCTC 12261	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.373