Detailed information
Bioinformatically predicted
Overview
| Name | comM | Type | Machinery gene |
| Locus tag | MMZ71_RS30810 | Genome accession | NZ_CP093022 |
| Coordinates | 6538995..6540488 (+) | Length | 497 a.a. |
| NCBI ID | WP_009314511.1 | Uniprot ID | A0A6N0KV96 |
| Organism | Pseudomonas aeruginosa strain H08 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 6508606..6557750 | 6538995..6540488 | within | 0 |
Gene organization within MGE regions
Location: 6508606..6557750
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MMZ71_RS30665 (MMZ71_30670) | algZ | 6508728..6509804 (-) | 1077 | WP_003096404.1 | alginate biosynthesis two-component system sensor histidine kinase AlgZ | - |
| MMZ71_RS30670 (MMZ71_30675) | argH | 6510029..6511423 (+) | 1395 | WP_033953682.1 | argininosuccinate lyase | - |
| MMZ71_RS30675 (MMZ71_30680) | - | 6511567..6512190 (-) | 624 | WP_019485038.1 | hypothetical protein | - |
| MMZ71_RS30680 (MMZ71_30685) | - | 6512769..6516038 (-) | 3270 | WP_033953680.1 | hypothetical protein | - |
| MMZ71_RS30685 (MMZ71_30690) | - | 6516035..6518110 (-) | 2076 | WP_058169759.1 | type VI secretion system tip protein VgrG | - |
| MMZ71_RS30690 (MMZ71_30695) | - | 6518310..6518828 (-) | 519 | WP_003083317.1 | Hcp family type VI secretion system effector | - |
| MMZ71_RS30695 (MMZ71_30700) | - | 6519121..6520101 (-) | 981 | WP_003096411.1 | magnesium transporter CorA family protein | - |
| MMZ71_RS30700 (MMZ71_30705) | - | 6520203..6520478 (+) | 276 | WP_003114340.1 | hypothetical protein | - |
| MMZ71_RS30705 (MMZ71_30710) | - | 6520611..6521378 (+) | 768 | WP_003096415.1 | ABC transporter substrate-binding protein | - |
| MMZ71_RS30710 (MMZ71_30715) | - | 6521421..6521654 (+) | 234 | WP_003096418.1 | TIGR02647 family protein | - |
| MMZ71_RS30715 (MMZ71_30720) | - | 6521803..6524655 (+) | 2853 | WP_033953668.1 | class I adenylate cyclase | - |
| MMZ71_RS30720 (MMZ71_30725) | - | 6524696..6525394 (+) | 699 | WP_003096422.1 | hypothetical protein | - |
| MMZ71_RS30725 (MMZ71_30730) | rnk | 6525438..6525842 (-) | 405 | WP_003096424.1 | nucleoside diphosphate kinase regulator | - |
| MMZ71_RS30730 (MMZ71_30735) | - | 6525979..6526188 (-) | 210 | WP_003161172.1 | DUF1289 domain-containing protein | - |
| MMZ71_RS30735 (MMZ71_30740) | cyaY | 6526166..6526501 (-) | 336 | WP_003121284.1 | iron donor protein CyaY | - |
| MMZ71_RS30740 (MMZ71_30745) | - | 6526755..6526895 (+) | 141 | WP_003096430.1 | lipoprotein | - |
| MMZ71_RS30745 (MMZ71_30750) | lysA | 6526906..6528153 (+) | 1248 | WP_003096431.1 | diaminopimelate decarboxylase | - |
| MMZ71_RS30750 (MMZ71_30755) | dapF | 6528164..6528994 (+) | 831 | WP_003098223.1 | diaminopimelate epimerase | - |
| MMZ71_RS30755 (MMZ71_30760) | - | 6529025..6529726 (+) | 702 | WP_003096433.1 | DUF484 family protein | - |
| MMZ71_RS30760 (MMZ71_30765) | xerC | 6529746..6530657 (+) | 912 | WP_003096434.1 | tyrosine recombinase XerC | - |
| MMZ71_RS30765 (MMZ71_30770) | - | 6530654..6531352 (+) | 699 | WP_033954735.1 | HAD family hydrolase | - |
| MMZ71_RS30770 (MMZ71_30775) | - | 6531383..6532552 (-) | 1170 | WP_003109812.1 | MFS transporter | - |
| MMZ71_RS30775 (MMZ71_30780) | - | 6532715..6534091 (+) | 1377 | WP_023092757.1 | PLP-dependent aminotransferase family protein | - |
| MMZ71_RS30780 (MMZ71_30785) | - | 6534116..6535030 (-) | 915 | WP_003096438.1 | fimbrial protein | - |
| MMZ71_RS30785 (MMZ71_30790) | sutA | 6535467..6535784 (-) | 318 | WP_003096440.1 | transcriptional regulator SutA | - |
| MMZ71_RS30790 (MMZ71_30795) | - | 6535862..6536287 (-) | 426 | WP_003096441.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| MMZ71_RS30795 (MMZ71_30800) | - | 6536548..6537876 (-) | 1329 | WP_003109815.1 | ammonium transporter | - |
| MMZ71_RS30800 (MMZ71_30805) | glnK | 6537916..6538254 (-) | 339 | WP_003096476.1 | P-II family nitrogen regulator | - |
| MMZ71_RS30805 (MMZ71_30810) | - | 6538694..6538954 (+) | 261 | WP_003096478.1 | accessory factor UbiK family protein | - |
| MMZ71_RS30810 (MMZ71_30815) | comM | 6538995..6540488 (+) | 1494 | WP_009314511.1 | YifB family Mg chelatase-like AAA ATPase | Machinery gene |
| MMZ71_RS30815 (MMZ71_30820) | betT | 6540613..6542598 (+) | 1986 | WP_003096496.1 | choline BCCT transporter BetT | - |
| MMZ71_RS30820 (MMZ71_30825) | pchP | 6542641..6543690 (-) | 1050 | WP_009314512.1 | phosphorylcholine phosphatase | - |
| MMZ71_RS30825 (MMZ71_30830) | - | 6543841..6544758 (-) | 918 | WP_004352313.1 | LysR substrate-binding domain-containing protein | - |
| MMZ71_RS30830 (MMZ71_30835) | - | 6544907..6546373 (+) | 1467 | WP_003110456.1 | NorM family multidrug efflux MATE transporter | - |
| MMZ71_RS30835 (MMZ71_30840) | - | 6546285..6547961 (-) | 1677 | WP_003121292.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
| MMZ71_RS30840 (MMZ71_30845) | rep | 6548149..6550158 (+) | 2010 | WP_003110454.1 | DNA helicase Rep | - |
| MMZ71_RS30845 (MMZ71_30850) | - | 6550292..6552010 (+) | 1719 | WP_003096506.1 | ubiquinone-dependent pyruvate dehydrogenase | - |
| MMZ71_RS30850 (MMZ71_30855) | - | 6552174..6552746 (+) | 573 | WP_003096508.1 | xanthine phosphoribosyltransferase | - |
| MMZ71_RS30855 (MMZ71_30860) | - | 6552754..6554613 (-) | 1860 | WP_079279195.1 | acetyl-CoA hydrolase/transferase C-terminal domain-containing protein | - |
| MMZ71_RS30860 (MMZ71_30865) | - | 6554823..6555251 (-) | 429 | WP_003096511.1 | cytochrome c5 family protein | - |
| MMZ71_RS30865 (MMZ71_30870) | - | 6555455..6556003 (-) | 549 | WP_003096513.1 | cupin domain-containing protein | - |
| MMZ71_RS30870 (MMZ71_30875) | alr | 6556154..6557227 (-) | 1074 | WP_003096515.1 | alanine racemase | - |
| MMZ71_RS30875 (MMZ71_30880) | - | 6557318..6557671 (-) | 354 | WP_003098273.1 | RidA family protein | - |
Sequence
Protein
Download Length: 497 a.a. Molecular weight: 53079.03 Da Isoelectric Point: 7.9587
>NTDB_id=661550 MMZ71_RS30810 WP_009314511.1 6538995..6540488(+) (comM) [Pseudomonas aeruginosa strain H08]
MSLAIVHSRAQVGVEAPCVSVEAHLANGLPSLTLVGLPETAVRESKDRVRSALLNAGFDFPARRITLNLAPADLPKDGGR
FDLAIALGILAASGQLPGTALDGLECLGELALSGAIRPVRGVLPAALAARDARRVLVVPKENAEEASLASGLTVFAVDHL
LEIAGHLSGQAPLLPYQARGLLRAPFPYPDLAEVQGQAAAKRALLVAAAGAHNLLLSGPPGTGKTLLASRLPGLLPALDE
DEALEVAAIHSVASHVPLRHWPQRPFRQPHHSASAPALVGGGSRPQPGEITLAHQGVLFLDELPEFERKVLEVLREPLES
GEIVIARANGRVRFPARFQLVAAMNPCPCGYLGDPSGRCRCTPEQVQRYRGKLSGPLLDRIDLHVSVLRESTSLQPGHGE
TATAEISERVGAARQRQLARQGCANAHLDLQAMHRNCALAEADRRWLEAAGERLELSLRALHRILKVARTLADLERIDAI
ERRHLAEALQYRAPTST
MSLAIVHSRAQVGVEAPCVSVEAHLANGLPSLTLVGLPETAVRESKDRVRSALLNAGFDFPARRITLNLAPADLPKDGGR
FDLAIALGILAASGQLPGTALDGLECLGELALSGAIRPVRGVLPAALAARDARRVLVVPKENAEEASLASGLTVFAVDHL
LEIAGHLSGQAPLLPYQARGLLRAPFPYPDLAEVQGQAAAKRALLVAAAGAHNLLLSGPPGTGKTLLASRLPGLLPALDE
DEALEVAAIHSVASHVPLRHWPQRPFRQPHHSASAPALVGGGSRPQPGEITLAHQGVLFLDELPEFERKVLEVLREPLES
GEIVIARANGRVRFPARFQLVAAMNPCPCGYLGDPSGRCRCTPEQVQRYRGKLSGPLLDRIDLHVSVLRESTSLQPGHGE
TATAEISERVGAARQRQLARQGCANAHLDLQAMHRNCALAEADRRWLEAAGERLELSLRALHRILKVARTLADLERIDAI
ERRHLAEALQYRAPTST
Nucleotide
Download Length: 1494 bp
>NTDB_id=661550 MMZ71_RS30810 WP_009314511.1 6538995..6540488(+) (comM) [Pseudomonas aeruginosa strain H08]
ATGTCCCTGGCGATTGTCCACAGCCGAGCCCAGGTCGGCGTCGAAGCCCCCTGCGTCAGCGTCGAGGCGCACCTGGCCAA
CGGCCTGCCTTCGCTGACCCTGGTCGGCCTGCCGGAAACCGCGGTGCGCGAGAGCAAGGACCGCGTGCGCAGCGCCCTGC
TCAATGCCGGTTTCGACTTCCCCGCGCGGCGCATCACCCTCAACCTCGCCCCCGCCGACCTGCCCAAGGACGGCGGTCGC
TTCGACCTGGCCATCGCACTCGGCATCCTCGCCGCCAGCGGCCAGTTGCCCGGCACCGCCCTCGACGGCCTGGAGTGCCT
TGGCGAACTGGCCCTGTCCGGGGCGATCCGGCCAGTGCGAGGCGTATTGCCGGCCGCGCTGGCGGCGCGCGACGCAAGGC
GCGTTCTGGTGGTACCGAAGGAAAATGCCGAAGAGGCCAGCCTGGCCAGCGGGCTGACGGTGTTCGCCGTGGACCACCTG
CTGGAGATCGCCGGACACCTCTCCGGCCAGGCCCCGCTGCTGCCCTACCAGGCCCGCGGCCTGCTCCGCGCGCCCTTCCC
TTATCCAGACCTGGCCGAGGTCCAGGGCCAGGCCGCCGCCAAGCGCGCCCTGCTGGTGGCCGCCGCCGGCGCGCACAACC
TGTTGCTCAGCGGCCCGCCGGGCACCGGCAAGACCCTCCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGGCGCTCGACGAG
GACGAGGCCCTGGAGGTCGCAGCGATCCATTCGGTGGCCAGCCACGTCCCCCTCAGGCACTGGCCGCAGCGACCGTTCCG
CCAGCCGCACCACTCCGCCTCCGCGCCGGCCCTGGTCGGCGGCGGCAGCCGCCCGCAGCCGGGCGAGATCACCCTGGCGC
ACCAGGGCGTGCTGTTCCTCGACGAACTGCCGGAGTTCGAGCGCAAGGTCCTGGAGGTCCTGCGCGAGCCGCTGGAAAGC
GGCGAGATCGTCATTGCCCGGGCCAACGGCCGGGTACGTTTCCCGGCGCGCTTCCAACTGGTGGCGGCGATGAATCCCTG
TCCCTGTGGCTACCTAGGCGATCCCAGCGGCCGCTGCCGCTGCACCCCGGAACAGGTCCAGCGCTACCGGGGCAAGCTGT
CCGGACCGCTGCTCGATCGCATCGACCTGCACGTCAGCGTGCTCCGCGAAAGCACCAGCCTGCAGCCAGGACACGGCGAA
ACCGCTACCGCCGAGATCAGCGAACGGGTTGGCGCAGCACGGCAACGGCAACTGGCCCGCCAGGGCTGCGCCAATGCCCA
TCTCGACCTCCAGGCGATGCACCGCAATTGTGCACTCGCCGAAGCGGACCGCCGCTGGCTGGAGGCTGCCGGAGAGCGCC
TGGAACTTTCCTTGCGCGCCTTGCATCGCATACTCAAGGTGGCCCGGACGCTGGCCGACCTGGAGCGCATCGATGCCATC
GAACGCCGGCACCTGGCGGAAGCCCTGCAGTATCGGGCACCGACCTCCACGTGA
ATGTCCCTGGCGATTGTCCACAGCCGAGCCCAGGTCGGCGTCGAAGCCCCCTGCGTCAGCGTCGAGGCGCACCTGGCCAA
CGGCCTGCCTTCGCTGACCCTGGTCGGCCTGCCGGAAACCGCGGTGCGCGAGAGCAAGGACCGCGTGCGCAGCGCCCTGC
TCAATGCCGGTTTCGACTTCCCCGCGCGGCGCATCACCCTCAACCTCGCCCCCGCCGACCTGCCCAAGGACGGCGGTCGC
TTCGACCTGGCCATCGCACTCGGCATCCTCGCCGCCAGCGGCCAGTTGCCCGGCACCGCCCTCGACGGCCTGGAGTGCCT
TGGCGAACTGGCCCTGTCCGGGGCGATCCGGCCAGTGCGAGGCGTATTGCCGGCCGCGCTGGCGGCGCGCGACGCAAGGC
GCGTTCTGGTGGTACCGAAGGAAAATGCCGAAGAGGCCAGCCTGGCCAGCGGGCTGACGGTGTTCGCCGTGGACCACCTG
CTGGAGATCGCCGGACACCTCTCCGGCCAGGCCCCGCTGCTGCCCTACCAGGCCCGCGGCCTGCTCCGCGCGCCCTTCCC
TTATCCAGACCTGGCCGAGGTCCAGGGCCAGGCCGCCGCCAAGCGCGCCCTGCTGGTGGCCGCCGCCGGCGCGCACAACC
TGTTGCTCAGCGGCCCGCCGGGCACCGGCAAGACCCTCCTGGCCAGCCGCCTGCCCGGCCTGCTGCCGGCGCTCGACGAG
GACGAGGCCCTGGAGGTCGCAGCGATCCATTCGGTGGCCAGCCACGTCCCCCTCAGGCACTGGCCGCAGCGACCGTTCCG
CCAGCCGCACCACTCCGCCTCCGCGCCGGCCCTGGTCGGCGGCGGCAGCCGCCCGCAGCCGGGCGAGATCACCCTGGCGC
ACCAGGGCGTGCTGTTCCTCGACGAACTGCCGGAGTTCGAGCGCAAGGTCCTGGAGGTCCTGCGCGAGCCGCTGGAAAGC
GGCGAGATCGTCATTGCCCGGGCCAACGGCCGGGTACGTTTCCCGGCGCGCTTCCAACTGGTGGCGGCGATGAATCCCTG
TCCCTGTGGCTACCTAGGCGATCCCAGCGGCCGCTGCCGCTGCACCCCGGAACAGGTCCAGCGCTACCGGGGCAAGCTGT
CCGGACCGCTGCTCGATCGCATCGACCTGCACGTCAGCGTGCTCCGCGAAAGCACCAGCCTGCAGCCAGGACACGGCGAA
ACCGCTACCGCCGAGATCAGCGAACGGGTTGGCGCAGCACGGCAACGGCAACTGGCCCGCCAGGGCTGCGCCAATGCCCA
TCTCGACCTCCAGGCGATGCACCGCAATTGTGCACTCGCCGAAGCGGACCGCCGCTGGCTGGAGGCTGCCGGAGAGCGCC
TGGAACTTTCCTTGCGCGCCTTGCATCGCATACTCAAGGTGGCCCGGACGCTGGCCGACCTGGAGCGCATCGATGCCATC
GAACGCCGGCACCTGGCGGAAGCCCTGCAGTATCGGGCACCGACCTCCACGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comM | Vibrio campbellii strain DS40M4 |
56.452 |
99.799 |
0.563 |
| comM | Haemophilus influenzae Rd KW20 |
55.467 |
100 |
0.561 |
| comM | Vibrio cholerae strain A1552 |
56.048 |
99.799 |
0.559 |
| comM | Glaesserella parasuis strain SC1401 |
54.691 |
100 |
0.551 |
| comM | Legionella pneumophila str. Paris |
49.901 |
100 |
0.507 |
| comM | Legionella pneumophila strain ERS1305867 |
49.901 |
100 |
0.507 |
| RA0C_RS07335 | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
46.154 |
100 |
0.471 |