Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG534_RS15855 Genome accession   NZ_CP108423
Coordinates   3531910..3533034 (+) Length   374 a.a.
NCBI ID   WP_326588709.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_01294     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3526910..3538034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG534_RS15840 (OG534_15875) - 3527434..3528282 (+) 849 WP_326588706.1 hypothetical protein -
  OG534_RS15845 (OG534_15880) - 3528379..3530151 (-) 1773 WP_326588707.1 hypothetical protein -
  OG534_RS15850 (OG534_15885) radA/sms 3530348..3531760 (+) 1413 WP_326588708.1 DNA repair protein RadA Machinery gene
  OG534_RS15855 (OG534_15890) disA 3531910..3533034 (+) 1125 WP_326588709.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG534_RS15860 (OG534_15895) - 3533159..3533980 (-) 822 WP_326588710.1 hypothetical protein -
  OG534_RS15865 (OG534_15900) - 3534195..3535112 (+) 918 WP_326588711.1 A/G-specific adenine glycosylase -
  OG534_RS15870 (OG534_15905) - 3535401..3535961 (+) 561 WP_326588712.1 SigE family RNA polymerase sigma factor -
  OG534_RS15875 (OG534_15910) - 3535997..3536638 (+) 642 WP_326593650.1 hypothetical protein -
  OG534_RS15880 (OG534_15915) cseB 3536668..3537381 (+) 714 WP_326588713.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40392.34 Da        Isoelectric Point: 5.0294

>NTDB_id=660319 OG534_RS15855 WP_326588709.1 3531910..3533034(+) (disA) [Streptomyces sp. NBC_01294]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALIIDKDITKILRAGVQLVPDASIHTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=660319 OG534_RS15855 WP_326588709.1 3531910..3533034(+) (disA) [Streptomyces sp. NBC_01294]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGCAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGTGCGGTCGCGCCTGGTCAGCCGCTGCGTGACGGCTTGGAGCGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTCC
TCGGCATGGACAAGTCCGTCGAGGCCATGTGCACCGGCGGTTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCATCGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTGCC
GGACGCGTCGATCCACACCGAGGAGACGGGCACGCGGCACCGCACGGCGGACCGCGTCTCGAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCCATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCTTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCACTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTGACGGCGGTGGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCGCTGCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGGGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCCTTGGCCGAGCTGGACGCGCTGACGCATCCGGAGCTGCTGGAACTGGCGATCGTGGCGAAGGCGCTGGGGTACACGG
GGTCGCCCGAGACCCTGGACTCGGCGGTGTCGCCGCGCGGGTACCGCCTGCTGGCGAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTGCAGACGGTGGA
TGGTGTGGGCGAGGCCCGGGCGCGCAGTGTCCGCGAGGGGCTGTCGCGCCTGGCGGAGTCCTCGATCCTCGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444