Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   MKZ88_RS24910 Genome accession   NZ_CP092635
Coordinates   5160632..5162152 (+) Length   506 a.a.
NCBI ID   WP_058650627.1    Uniprot ID   A0A851FXY8
Organism   Enterobacter cloacae strain EFN743     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 5155632..5167152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKZ88_RS24885 (MKZ88_24885) ilvE 5157198..5158127 (-) 930 WP_013099287.1 branched-chain-amino-acid transaminase -
  MKZ88_RS24890 (MKZ88_24890) ilvM 5158146..5158409 (-) 264 WP_003860184.1 acetolactate synthase 2 small subunit -
  MKZ88_RS24895 (MKZ88_24895) ilvG 5158406..5160052 (-) 1647 WP_058650626.1 acetolactate synthase 2 catalytic subunit -
  MKZ88_RS24900 (MKZ88_24900) ilvX 5160055..5160105 (-) 51 WP_102046757.1 peptide IlvX -
  MKZ88_RS24905 (MKZ88_24905) ilvL 5160192..5160290 (-) 99 WP_023620831.1 ilv operon leader peptide -
  MKZ88_RS24910 (MKZ88_24910) comM 5160632..5162152 (+) 1521 WP_058650627.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  MKZ88_RS24915 (MKZ88_24915) - 5162185..5162523 (-) 339 WP_013099290.1 DUF413 domain-containing protein -
  MKZ88_RS24920 (MKZ88_24920) hdfR 5162642..5163463 (+) 822 WP_058650628.1 HTH-type transcriptional regulator HdfR -

Sequence

Protein


Download         Length: 506 a.a.        Molecular weight: 54939.87 Da        Isoelectric Point: 6.9981

>NTDB_id=659471 MKZ88_RS24910 WP_058650627.1 5160632..5162152(+) (comM) [Enterobacter cloacae strain EFN743]
MSLSVVYTRAAIGVKAPLISVEVHLSNGLPGLTLVGLPETTVKEARDRVRSAIINSGYTFPAKKITINLAPADLPKEGGR
YDLPIAIALLAASEQLNTARLGSYEFIGELALTGALRGVPGAISGALEAIHAGRQIIVANENASEVSLIAEKGCLVAGHL
QEVCAHLEGQHTLSEPEETGDILPESPDDLSDIIGQEQGKRALEITAAGGHNLLLIGPPGTGKTMLASRLNGLLPPLNNH
EALESAAIFSLVSSASLQKQWRRRPFRSPHHSASLTAMVGGGSIPGPGEISLAHNGILFLDELPEFERRVLDALREPIES
GEIHISRTRAKISYPAQFQLVAAMNPSPSGHYQGNHNRCTPEQTLRYLGKLSGPFLDRFDLSLEIPLPPPGLLSQTTIRG
ESTAKVRERVIASQARQYARQHKLNARLDNAEIRQFCHLKAEDACWLEETLTRFGLSIRAWQRLLKVARTIADVEGDPEI
ERHHLQEALSYRAIDRLLLHLQKLLA

Nucleotide


Download         Length: 1521 bp        

>NTDB_id=659471 MKZ88_RS24910 WP_058650627.1 5160632..5162152(+) (comM) [Enterobacter cloacae strain EFN743]
ATGTCACTGTCAGTTGTTTACACGCGCGCGGCTATCGGAGTAAAGGCACCGCTTATTTCTGTGGAGGTTCATCTGAGTAA
TGGGCTCCCTGGGCTAACGCTTGTCGGCTTGCCAGAAACCACGGTCAAAGAAGCCAGAGATCGGGTTCGCAGCGCAATTA
TCAATAGCGGTTATACCTTCCCCGCCAAGAAGATCACGATCAACCTTGCTCCCGCAGATCTGCCCAAGGAGGGCGGACGA
TACGATTTACCTATCGCTATTGCGCTTCTCGCAGCCTCTGAGCAGCTCAACACTGCGAGGCTAGGCTCGTACGAGTTCAT
TGGCGAACTGGCGCTTACAGGCGCGTTAAGAGGCGTTCCTGGCGCCATCTCTGGTGCGCTGGAAGCCATTCATGCCGGTC
GACAAATTATTGTAGCCAATGAAAATGCCTCAGAAGTGAGCCTGATTGCCGAGAAAGGGTGCCTGGTCGCGGGGCATTTA
CAGGAAGTCTGCGCGCACCTTGAAGGCCAACATACGCTCTCCGAGCCAGAGGAAACCGGAGATATCCTGCCTGAAAGCCC
GGACGACCTCAGCGATATTATCGGGCAGGAGCAGGGGAAGCGGGCACTGGAGATCACCGCAGCCGGAGGACATAACCTGT
TGCTGATTGGCCCGCCGGGAACAGGGAAAACCATGCTGGCGAGCAGGCTGAATGGGTTATTGCCACCACTCAATAATCAT
GAGGCACTTGAAAGCGCAGCGATATTTAGCCTGGTGAGCTCTGCATCATTGCAAAAACAGTGGCGACGACGCCCTTTTCG
CTCTCCCCATCACAGTGCCTCCCTGACGGCCATGGTCGGAGGGGGCTCCATTCCGGGGCCGGGAGAGATCTCGCTGGCAC
ACAATGGCATCCTGTTCCTTGATGAACTGCCTGAGTTTGAACGCCGCGTACTGGATGCCCTGCGGGAACCTATCGAATCT
GGCGAGATCCATATCTCCCGCACGCGCGCCAAAATAAGCTACCCGGCACAGTTCCAGCTGGTTGCCGCCATGAACCCCAG
CCCATCAGGCCATTATCAGGGAAATCATAATCGCTGCACGCCTGAGCAGACGCTGCGCTATCTGGGGAAGCTGTCAGGCC
CTTTCCTCGATCGTTTTGATTTATCCCTGGAGATCCCCTTACCGCCCCCTGGTTTGCTCAGCCAGACAACGATACGCGGT
GAGAGCACAGCGAAGGTTCGCGAACGGGTTATCGCCTCACAGGCCCGACAATACGCTCGTCAACATAAGCTTAATGCGCG
TCTGGATAATGCTGAGATTCGGCAGTTTTGCCATCTTAAGGCTGAGGATGCCTGCTGGCTTGAAGAGACATTGACGCGAT
TTGGGCTCTCGATCCGTGCATGGCAGCGCCTGCTGAAAGTGGCTCGCACTATTGCCGATGTGGAAGGAGACCCAGAGATT
GAAAGACACCATCTGCAGGAAGCGCTGAGCTATCGCGCCATAGATCGGTTGTTGCTGCACCTGCAAAAATTACTGGCATA
A

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(189-386)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(400-492)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A851FXY8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Haemophilus influenzae Rd KW20

58.984

100

0.597
  comM Vibrio cholerae strain A1552

59.96

99.209

0.595
  comM Vibrio campbellii strain DS40M4

59.722

99.605

0.595
  comM Glaesserella parasuis strain SC1401

58.974

100

0.591
  comM Legionella pneumophila str. Paris

50.302

98.221

0.494
  comM Legionella pneumophila strain ERS1305867

50.302

98.221

0.494
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

43.984

100

0.441