Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG438_RS19625 Genome accession   NZ_CP108291
Coordinates   4477287..4478411 (+) Length   374 a.a.
NCBI ID   WP_266830670.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00035     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4472287..4483411
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG438_RS19610 (OG438_19585) - 4472861..4473700 (+) 840 WP_405924440.1 hypothetical protein -
  OG438_RS19615 (OG438_19590) - 4473733..4475598 (-) 1866 WP_405924441.1 BACON domain-containing protein -
  OG438_RS19620 (OG438_19595) radA/sms 4475806..4477215 (+) 1410 WP_326721492.1 DNA repair protein RadA Machinery gene
  OG438_RS19625 (OG438_19600) disA 4477287..4478411 (+) 1125 WP_266830670.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG438_RS19630 (OG438_19605) - 4478513..4479334 (-) 822 WP_326721493.1 hypothetical protein -
  OG438_RS19635 (OG438_19610) - 4479668..4480582 (+) 915 WP_326721494.1 A/G-specific adenine glycosylase -
  OG438_RS19640 (OG438_19615) - 4480827..4481378 (+) 552 WP_266456951.1 SigE family RNA polymerase sigma factor -
  OG438_RS19645 (OG438_19620) - 4481402..4482127 (+) 726 WP_405924442.1 hypothetical protein -
  OG438_RS19650 (OG438_19625) cseB 4482167..4482883 (+) 717 WP_326721496.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40147.92 Da        Isoelectric Point: 5.0095

>NTDB_id=658047 OG438_RS19625 WP_266830670.1 4477287..4478411(+) (disA) [Streptomyces sp. NBC_00035]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVDFTVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELHALTHAELLELPTVARALGYTGSPEALDSAVSPRGYRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=658047 OG438_RS19625 WP_266830670.1 4477287..4478411(+) (disA) [Streptomyces sp. NBC_00035]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCGCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTCGAGCGGATCCTCCGCGGCAACACCGGAGGACTCATCGTGC
TCGGGTCCGACAAGACCGTCGAGGCGATGTGTACCGGCGGCTTCGTGCTGGACGTCGAGTTCACCGCGACGCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGATCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTGCAACTGGTGCC
CGACCCGACCATCCCGACGGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGACTTCACAG
TCGTCTCGGTCTCCCAGTCGATGCGCCTCATCGCCCTCTACGTGGACGGCCAGCGCCGCGTCCTGGAAGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTTCGTCTCGACGAGGTCGCGGGCACCCTGTC
GGCCCTCGAGATCGAGGACCTGGTCACGGTCCGCGACGTCTCTGCGGTGGCCCAGCGACTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTCGTGGAGCTGGGCACCGACGGGCGCCTTCTCGCGCTCCAGCTCGACGAGTTGATCGCC
GGCGTCGAGCCCGAGCGTGAACTCGTCGTACGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTCTCCGAGCTCCACGCGCTCACCCACGCCGAGCTGCTCGAACTCCCCACGGTGGCACGGGCGTTGGGCTACACCG
GCTCCCCCGAGGCGCTGGACTCCGCCGTCTCCCCGCGCGGCTACCGTCTCCTCGCCAAGGTGCCCCGCCTGCCCGGCGCG
ATCATCGACCGCCTCGTGGAGCACTTCGGGGGCCTGCAGAAGCTCCTCGCCGCGAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCGCGCAGCGTCCGTGAGGGTCTGTCGCGACTGGCGGAGTCTTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433