Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   MJX77_RS04470 Genome accession   NZ_CP092454
Coordinates   936444..937577 (+) Length   377 a.a.
NCBI ID   WP_252060636.1    Uniprot ID   -
Organism   Acinetobacter sp. AHP123     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 931444..942577
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJX77_RS04445 - 931726..931932 (-) 207 WP_224970396.1 hypothetical protein -
  MJX77_RS04450 - 931987..934074 (-) 2088 WP_252060633.1 TonB-dependent copper receptor -
  MJX77_RS04455 - 934147..934572 (-) 426 WP_252060634.1 DUF2946 family protein -
  MJX77_RS04460 def 934616..935146 (-) 531 WP_004795267.1 peptide deformylase -
  MJX77_RS04465 tsaP 935269..936423 (+) 1155 WP_252060635.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  MJX77_RS04470 dprA 936444..937577 (+) 1134 WP_252060636.1 DNA-processing protein DprA Machinery gene
  MJX77_RS04475 - 937627..938196 (+) 570 WP_013199176.1 Sua5/YciO/YrdC/YwlC family protein -
  MJX77_RS04480 - 938588..939508 (-) 921 WP_252060637.1 DMT family transporter -
  MJX77_RS04485 - 939620..940273 (-) 654 WP_252061308.1 TetR/AcrR family transcriptional regulator -
  MJX77_RS04490 - 940409..941623 (+) 1215 WP_005309158.1 MFS transporter -
  MJX77_RS04495 - 941645..942409 (+) 765 WP_171430472.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41897.64 Da        Isoelectric Point: 6.5878

>NTDB_id=657717 MJX77_RS04470 WP_252060636.1 936444..937577(+) (dprA) [Acinetobacter sp. AHP123]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIVNYFGSCEKAVQPAGLSQWCNLGLHTNHLKRVDEFQTAQGQAQFEKLIEQI
QQYTDFILTSEDLGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDSTYPAQNKKLAEQILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQKSTEEVVVSCAPEI
PEHLINLYQSLDWVGQNIDQLVIHHSQPVAELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=657717 MJX77_RS04470 WP_252060636.1 936444..937577(+) (dprA) [Acinetobacter sp. AHP123]
ATGCTTACTCAACTTTCTTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAACACTCCTTAGTTAGCTTCAA
AAAAATTGTCAATTATTTTGGTAGCTGTGAAAAAGCGGTCCAACCTGCTGGGTTATCTCAATGGTGCAATCTCGGGTTAC
ATACTAATCATTTAAAACGCGTAGATGAATTTCAAACTGCTCAGGGTCAGGCTCAGTTTGAAAAACTAATTGAGCAGATC
CAGCAATATACCGACTTTATTTTAACGTCAGAAGACCTTGGCTATCCTACGCAATTACTACCTTATACAGACCATCCACC
CATCATATTTGGGAAAGGCCAAGCGCAAGCTTTGTTACAACCACAAATTGCGATTGTAGGTAGTCGAAAACCAAGCCCGC
ATGGTCGTCAGGTTGCTTATGATTTTGCCTATTACTTAAGTGAAAAAGGATTTTATGTAAGTAGTGGTTTGGCATATGGG
ATTGACGAAGCTGCTCACCAAGGAGCTTCAGCACATCAACGTACGATTGCTGTGACAGGGACCGGTTTAGACAGTACCTA
CCCTGCTCAAAATAAAAAACTTGCAGAACAGATCTTGGCTCAAAACGGCGCCATCATTACTGAGTTTTTGCCCGGTACAC
CACCATTACAGCAACATTTTCCTCGTAGGAACCGAATTGTCAGTGGCCTGAGTTTAGGTGTGTTAGTGGTAGAAGCTACT
TTAAAAAGTGGTTCTCTCATTACTGCGAACAAAGCTGCCGAGCAAGGTAAAACCGTATTTGCCATTCCTGGCCATATTTA
CAGTGAGTTTCATCAGGGCTGCCATCAACTTATTCGTGAGGGAGCCATTTTAGTCGATCATCCTGAGCAGATTATTGAAG
ATCTTGCTTTACCTACTCAATGGCAAAGTCAGCAACAGAAGTCAACTGAAGAGGTCGTGGTTTCTTGTGCCCCAGAAATT
CCTGAACATTTGATTAACCTTTATCAGTCTTTAGACTGGGTCGGACAAAATATTGACCAGCTTGTCATACACCACTCTCA
ACCTGTGGCAGAACTCACCTCTTCACTCATGGAACTAGAACTACTTGGTTTATGTATGCAACAATCAGGGCTGTATTTAC
GTTGTCGCTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

89.39

100

0.894

  dprA Acinetobacter baumannii strain A118

88.859

100

0.889

  dprA Acinetobacter baylyi ADP1

70.341

100

0.711

  dprA Vibrio cholerae strain A1552

43.243

88.329

0.382