Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   MJX77_RS04465 Genome accession   NZ_CP092454
Coordinates   935269..936423 (+) Length   384 a.a.
NCBI ID   WP_252060635.1    Uniprot ID   -
Organism   Acinetobacter sp. AHP123     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 930269..941423
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJX77_RS04440 - 930444..931658 (+) 1215 WP_252060632.1 oxygenase MpaB family protein -
  MJX77_RS04445 - 931726..931932 (-) 207 WP_224970396.1 hypothetical protein -
  MJX77_RS04450 - 931987..934074 (-) 2088 WP_252060633.1 TonB-dependent copper receptor -
  MJX77_RS04455 - 934147..934572 (-) 426 WP_252060634.1 DUF2946 family protein -
  MJX77_RS04460 def 934616..935146 (-) 531 WP_004795267.1 peptide deformylase -
  MJX77_RS04465 tsaP 935269..936423 (+) 1155 WP_252060635.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  MJX77_RS04470 dprA 936444..937577 (+) 1134 WP_252060636.1 DNA-processing protein DprA Machinery gene
  MJX77_RS04475 - 937627..938196 (+) 570 WP_013199176.1 Sua5/YciO/YrdC/YwlC family protein -
  MJX77_RS04480 - 938588..939508 (-) 921 WP_252060637.1 DMT family transporter -
  MJX77_RS04485 - 939620..940273 (-) 654 WP_252061308.1 TetR/AcrR family transcriptional regulator -

Sequence

Protein


Download         Length: 384 a.a.        Molecular weight: 42532.47 Da        Isoelectric Point: 7.3317

>NTDB_id=657716 MJX77_RS04465 WP_252060635.1 935269..936423(+) (tsaP) [Acinetobacter sp. AHP123]
MKKVFNGMVEFHALGIKKHLLAFALFTGVAMGTVAEVHAASPNHNPPSLKSNAPHVYVVKRGDTLWDISGHFLSKPWRWP
EIWANNQHVKNPHWIYPGDRLLLCSLAGRPLIGKDEGDGCIGIIRRYTGQMTNLQPQVRVESLNDNVPVIPLEHIKQWLE
HSTILPADAIEHTPYVVGTADQRVLAARGQTIYARGQGLVNGQRYAVYREGEPYYFTDSKGKKHSLGIELQQVASGIAIS
SEKDITTLELTDSYNSEVRRGDRVMPEEEATLPTLFYPVDATQVTDAGKIIRVMGSIGSAAKNSVVTLDRGTAQGIQVGQ
VFDITQKGETIRDPKTKEPIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPRFDD

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=657716 MJX77_RS04465 WP_252060635.1 935269..936423(+) (tsaP) [Acinetobacter sp. AHP123]
ATGAAAAAGGTTTTTAACGGCATGGTTGAATTTCATGCTTTGGGGATAAAAAAGCATTTACTTGCTTTCGCACTTTTTAC
AGGGGTTGCAATGGGTACAGTAGCAGAGGTTCATGCTGCTAGTCCAAACCATAATCCACCCTCTCTAAAAAGTAATGCAC
CACATGTCTACGTTGTAAAACGTGGAGATACGCTATGGGATATTTCCGGTCATTTCCTAAGTAAACCTTGGCGCTGGCCA
GAAATCTGGGCAAATAATCAACATGTCAAAAATCCACACTGGATTTATCCTGGTGACCGATTGTTGTTATGCAGTTTAGC
GGGTCGACCATTGATCGGTAAAGATGAGGGAGATGGTTGCATTGGCATTATTCGTCGCTACACAGGCCAAATGACAAACT
TGCAACCTCAAGTTCGTGTGGAATCGCTTAACGACAATGTGCCTGTTATTCCACTTGAACATATCAAACAGTGGTTAGAA
CACAGCACAATTTTGCCAGCCGACGCAATTGAACACACTCCTTATGTAGTGGGAACTGCTGATCAACGCGTGCTTGCCGC
AAGAGGCCAAACCATTTATGCACGTGGACAAGGTTTAGTTAATGGTCAACGTTATGCAGTCTACCGTGAAGGCGAACCTT
ATTATTTCACAGACAGTAAAGGTAAAAAGCATAGTCTAGGTATTGAACTGCAACAAGTTGCTTCAGGGATTGCGATCTCT
TCTGAAAAGGACATAACAACGCTTGAGTTAACTGATAGCTACAATTCCGAAGTACGCCGTGGTGATCGGGTTATGCCAGA
AGAAGAAGCTACATTACCTACTTTATTTTATCCGGTAGATGCCACTCAAGTTACAGATGCTGGCAAGATCATTCGTGTAA
TGGGTTCAATTGGCAGCGCTGCAAAAAATAGTGTGGTGACTTTGGACCGAGGTACAGCACAAGGGATTCAAGTAGGACAA
GTTTTTGATATTACTCAAAAAGGTGAAACCATTCGAGACCCTAAAACCAAAGAACCAATACAGTTGCCTGGACAACAGAT
TGGTAGTCTGATGGTTTTCAGAACCTTTGATCAGCTTAGCTATGCCTACGTATTAGAAAGTGACCTACCTATTAAAGTTG
GTTCAAGTATTCAGCCACCTCGTTTTGATGATTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(57-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

89.323

100

0.893