Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   MIS45_RS00785 Genome accession   NZ_CP092361
Coordinates   144231..145433 (+) Length   400 a.a.
NCBI ID   WP_249450694.1    Uniprot ID   -
Organism   Wielerella bovis strain CCUG 44465     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 139231..150433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MIS45_RS00765 (MIS45_00765) ffh 139993..141357 (+) 1365 WP_249450691.1 signal recognition particle protein -
  MIS45_RS00770 (MIS45_00770) - 141536..142153 (-) 618 WP_249450692.1 inner membrane CreD family protein -
  MIS45_RS00775 (MIS45_00775) - 142471..143148 (+) 678 WP_249447008.1 response regulator -
  MIS45_RS00780 (MIS45_00780) - 143142..144110 (+) 969 WP_249450693.1 histidine kinase dimerization/phospho-acceptor domain-containing protein -
  MIS45_RS00785 (MIS45_00785) dprA 144231..145433 (+) 1203 WP_249450694.1 DNA-processing protein DprA Machinery gene
  MIS45_RS00790 (MIS45_00790) - 145578..146120 (-) 543 Protein_151 IS630 family transposase -
  MIS45_RS00795 (MIS45_00795) - 146113..146415 (-) 303 WP_249441922.1 IS630 transposase-related protein -
  MIS45_RS00800 (MIS45_00800) tsf 146734..147588 (-) 855 WP_249450695.1 translation elongation factor Ts -
  MIS45_RS00805 (MIS45_00805) rpsB 147673..148401 (-) 729 WP_249450696.1 30S ribosomal protein S2 -

Sequence


Protein


Download         Length: 400 a.a.        Molecular weight: 42518.33 Da        Isoelectric Point: 6.7329

>NTDB_id=656765 MIS45_RS00785 WP_249450694.1 144231..145433(+) (dprA) [Wielerella bovis strain CCUG 44465]
MTESERYAWLQLAFTPYVGAETFAQLLATFGTPQAALSAPADAIAQQGKHAKQAAAKWHDTTLARQATDAALTWAQQDGC
RLMLSCDDDYPALLAEGITAPPVLFLRGNTALLHQTSVGIVGSRHATPQAMRIAQDFGRALSEHNITVISGMAAGIDTAA
HIGALCGAGSTIAVWGTGIDRIYPASNQKLARDIADKGLIISEFPLETRPLAGNFPRRNRIIAAQSHAVLVVEAALESGS
LITARQAAEMGRDVMAIPGSIDNPHSKGCHKLIKEGAKLVECLDDILSELGHILPDKAYPQFSGSLKTSVKAHTKHNLST
KTSTNPVMINNASFQAASTPITTIDTAHSLLQQMGYDPVHPDTLAANSSLSASDIYALLTEWELEGIVASLAGGRYQRIK

Nucleotide


Download         Length: 1203 bp        

>NTDB_id=656765 MIS45_RS00785 WP_249450694.1 144231..145433(+) (dprA) [Wielerella bovis strain CCUG 44465]
ATGACTGAATCCGAACGCTACGCATGGTTGCAACTGGCTTTCACACCCTATGTTGGTGCGGAAACTTTTGCGCAGTTGCT
GGCAACATTTGGCACACCGCAAGCAGCTTTGAGTGCCCCAGCCGATGCCATCGCCCAGCAAGGCAAACACGCCAAACAAG
CAGCAGCAAAATGGCACGACACCACATTAGCACGACAAGCAACTGATGCCGCGCTGACTTGGGCACAACAAGATGGCTGC
CGTTTGATGCTGTCTTGCGATGACGATTATCCTGCGCTATTGGCAGAAGGCATCACCGCACCACCCGTATTATTTTTGCG
TGGCAATACGGCATTGTTACATCAAACATCGGTTGGCATAGTCGGTAGTCGCCACGCGACACCACAAGCCATGCGGATTG
CCCAAGATTTTGGTAGGGCATTGAGTGAACATAATATTACGGTTATTTCAGGCATGGCAGCAGGCATTGATACCGCCGCG
CATATTGGCGCATTGTGTGGCGCAGGCAGCACGATTGCCGTATGGGGAACAGGCATTGACCGCATTTATCCCGCATCCAA
CCAAAAATTGGCACGCGATATTGCCGACAAAGGCTTGATTATTTCCGAATTTCCCTTGGAGACCCGTCCATTGGCAGGCA
ATTTTCCGCGCCGCAACCGCATCATCGCCGCGCAAAGCCACGCCGTTTTGGTGGTGGAAGCCGCATTGGAAAGTGGTTCG
TTGATTACTGCCAGACAAGCCGCCGAAATGGGGCGCGATGTGATGGCAATACCTGGTTCCATAGACAATCCGCACAGCAA
AGGCTGCCACAAACTCATCAAAGAAGGGGCAAAATTAGTAGAATGTTTGGACGATATTTTGAGTGAATTGGGACATATTT
TGCCTGATAAGGCTTATCCACAATTTTCAGGCAGCCTGAAAACATCTGTTAAAGCACATACCAAACACAATTTATCCACA
AAAACATCCACAAATCCTGTGATGATAAATAATGCCAGTTTTCAGGCTGCCTCTACGCCCATTACAACAATAGATACGGC
TCATTCCTTGTTGCAACAAATGGGCTACGACCCTGTTCATCCCGATACTTTGGCAGCAAATAGCTCATTATCTGCCAGCG
ATATTTATGCCTTGCTGACAGAATGGGAATTGGAAGGAATTGTGGCAAGTTTAGCAGGTGGACGCTATCAACGAATTAAA
TAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Neisseria meningitidis strain C311

60.05

100

0.605

  dprA Neisseria meningitidis MC58

60.05

100

0.605

  dprA Neisseria gonorrhoeae strain FA1090

59.606

100

0.605

  dprA Neisseria gonorrhoeae MS11

59.606

100

0.605

  dprA Glaesserella parasuis strain SC1401

37.879

99

0.375