NTDB

Overview

Name	comM	Type	Machinery gene
Locus tag	MIS31_RS04120	Genome accession	NZ_CP092360
Coordinates	776792..778291 (-)	Length	499 a.a.
NCBI ID	WP_249447359.1	Uniprot ID	-
Organism	Wielerella bovis strain 07LB258
Function	ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 771792..783291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MIS31_RS04095 (MIS31_04095)	-	772019..772753 (-)	735	WP_249447357.1	lysophospholipid acyltransferase family protein	-
MIS31_RS04100 (MIS31_04100)	map	772945..773721 (-)	777	WP_249443329.1	type I methionyl aminopeptidase	-
MIS31_RS04105 (MIS31_04105)	-	773935..774756 (-)	822	WP_249443330.1	undecaprenyl-diphosphate phosphatase	-
MIS31_RS04110 (MIS31_04110)	-	774824..775534 (-)	711	WP_249443331.1	thiol:disulfide interchange protein DsbA/DsbL	-
MIS31_RS04115 (MIS31_04115)	-	775557..776669 (-)	1113	WP_249447358.1	SPOR domain-containing protein	-
MIS31_RS04120 (MIS31_04120)	comM	776792..778291 (-)	1500	WP_249447359.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
MIS31_RS04125 (MIS31_04125)	-	778302..778565 (-)	264	WP_249443334.1	accessory factor UbiK family protein	-
MIS31_RS04130 (MIS31_04130)	metK	778713..779882 (-)	1170	WP_249443336.1	methionine adenosyltransferase	-
MIS31_RS04135 (MIS31_04135)	-	780539..781729 (+)	1191	WP_249447360.1	amino acid aminotransferase	-
MIS31_RS04140 (MIS31_04140)	nhaC	781852..783234 (+)	1383	WP_249447361.1	Na+/H+ antiporter NhaC	-

Sequence

Protein

Download Length: 499 a.a. Molecular weight: 53544.46 Da Isoelectric Point: 7.5353

                                >NTDB_id=656745 MIS31_RS04120 WP_249447359.1 776792..778291(-) (comM) [Wielerella bovis strain 07LB258]

MSFAVVNSRALSGMNAPLVEVEVHLANGLPQFNLVGLPDTEVKESRDRVRAAIIQSGFDFPAQKITVNLAPADLPKESAR

FDLPIAVGILAASAQIASDVLADYEFAGELALSGALRPVRGALAMAWQGKQANRAFMLPQENAVAAAVIGDIRVFGASSL

SQVAAHLNGTQPLSPQRPPELFRQPENTQLPDLRDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLAQRLPSILPPL

SDDELISVWALRSLLPNFSGCLNDARRPFRSPHHSASAAALVGGGSDPKPGEISLAHHGVLFLDELPEFDRKVLEMLREP

LESGEIHISRASRQATYPAQFQLVAAMNPCPCGYLGHPAKPCRCTPDAVQRYRDRISGPLLDRIDLTIEVPALPAADLVN

AQMGEDSATVLQRVQAARTKQLARQGKTNAALNPTELDTLANISPEAKNALGEMLEKLSLSARSFHRILRVARTLADLAN

DDVVTRAHVLRAIGFRRAL

Nucleotide

Download Length: 1500 bp

                                >NTDB_id=656745 MIS31_RS04120 WP_249447359.1 776792..778291(-) (comM) [Wielerella bovis strain 07LB258]

ATGAGCTTTGCTGTCGTCAATAGCCGCGCACTAAGCGGCATGAACGCGCCCTTGGTGGAAGTGGAAGTCCATCTTGCCAA

CGGTTTGCCACAATTCAATCTGGTCGGCTTACCCGATACCGAAGTGAAAGAAAGCCGCGACCGTGTGCGTGCCGCCATCA

TTCAAAGCGGCTTTGATTTTCCCGCGCAAAAAATCACCGTCAATCTCGCGCCAGCCGATTTGCCCAAAGAATCCGCTCGT

TTTGATTTACCGATTGCGGTGGGCATTCTCGCCGCATCGGCACAAATCGCGTCCGATGTGTTGGCAGATTATGAGTTTGC

AGGCGAATTGGCATTATCGGGTGCGCTGCGTCCTGTTCGTGGCGCGTTGGCAATGGCGTGGCAAGGCAAACAAGCCAATC

GCGCATTTATGTTGCCGCAGGAAAATGCGGTCGCAGCCGCTGTGATTGGCGACATTCGCGTATTCGGTGCCAGCAGTTTG

AGCCAAGTTGCCGCACATTTAAATGGCACACAACCTTTATCGCCACAACGTCCACCCGAATTGTTCAGGCAGCCTGAAAA

CACGCAATTACCCGATTTACGCGATGTTAAAGGGCAACACACCGCGCGTTTAGCATTGGAAATTGCTGCGGCAGGCGGAC

ACAGTTTATTGATGATGGGCCCACCAGGGACGGGAAAATCCATGCTTGCGCAACGTTTGCCGTCTATTTTGCCGCCTTTA

TCCGATGACGAATTGATTTCCGTGTGGGCATTGCGTTCTTTGTTACCGAATTTTTCAGGCTGCCTGAACGATGCACGCCG

CCCGTTTCGCAGTCCACATCATTCCGCCAGCGCAGCCGCATTGGTTGGTGGTGGTTCTGACCCCAAACCGGGGGAAATTT

CTCTGGCACATCACGGCGTATTATTTTTGGACGAGTTGCCTGAATTTGACCGAAAAGTATTGGAAATGTTGCGCGAACCA

TTGGAAAGTGGCGAAATTCATATTTCACGCGCCAGCCGACAAGCAACTTATCCTGCCCAATTTCAATTGGTTGCGGCGAT

GAATCCCTGTCCATGCGGTTATTTGGGACACCCAGCTAAACCCTGTCGCTGCACGCCCGATGCGGTGCAACGATACCGCG

ACCGCATTTCAGGCCCCTTGCTTGACCGCATTGATTTGACGATTGAAGTCCCCGCGTTGCCAGCCGCCGATTTGGTCAAC

GCACAAATGGGCGAAGACAGCGCGACCGTGTTGCAACGTGTTCAGGCTGCTCGTACCAAACAATTGGCGCGACAAGGCAA

AACCAATGCCGCACTCAATCCCACCGAATTGGATACATTGGCAAATATCAGTCCCGAAGCCAAAAATGCATTGGGCGAAA

TGTTGGAAAAATTAAGTTTATCAGCACGCAGTTTTCATCGCATTTTGCGTGTAGCGCGAACATTGGCTGATTTGGCAAAT

GATGATGTGGTAACACGCGCCCATGTTTTGCGTGCGATTGGATTTCGGCGTGCGTTGTAA

Domains

Predicted by InterproScan.

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(404-496)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comM	Vibrio cholerae strain A1552	53.32	99.599	0.531
comM	Vibrio campbellii strain DS40M4	52.096	100	0.523
comM	Glaesserella parasuis strain SC1401	50.797	100	0.511
comM	Haemophilus influenzae Rd KW20	50.1	100	0.501
comM	Legionella pneumophila str. Paris	48.622	100	0.495
comM	Legionella pneumophila strain ERS1305867	48.622	100	0.495
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.4	100	0.435

Detailed information NTG0656745