NTDB

Overview

Name	comM	Type	Machinery gene
Locus tag	MIS44_RS04375	Genome accession	NZ_CP092357
Coordinates	815066..816565 (-)	Length	499 a.a.
NCBI ID	WP_249449303.1	Uniprot ID	-
Organism	Wielerella bovis strain 10LB456
Function	ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 810066..821565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MIS44_RS04350 (MIS44_04350)	-	810302..811039 (-)	738	WP_249449301.1	lysophospholipid acyltransferase family protein	-
MIS44_RS04355 (MIS44_04355)	map	811231..812007 (-)	777	WP_249443329.1	type I methionyl aminopeptidase	-
MIS44_RS04360 (MIS44_04360)	-	812221..813042 (-)	822	WP_249443330.1	undecaprenyl-diphosphate phosphatase	-
MIS44_RS04365 (MIS44_04365)	-	813110..813820 (-)	711	WP_249443331.1	thiol:disulfide interchange protein DsbA/DsbL	-
MIS44_RS04370 (MIS44_04370)	-	813843..814943 (-)	1101	WP_249449302.1	SPOR domain-containing protein	-
MIS44_RS04375 (MIS44_04375)	comM	815066..816565 (-)	1500	WP_249449303.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
MIS44_RS04380 (MIS44_04380)	-	816576..816839 (-)	264	WP_249443334.1	accessory factor UbiK family protein	-
MIS44_RS04385 (MIS44_04385)	metK	816987..818156 (-)	1170	WP_249443336.1	methionine adenosyltransferase	-
MIS44_RS04390 (MIS44_04390)	-	818813..820003 (+)	1191	WP_249449304.1	amino acid aminotransferase	-
MIS44_RS04395 (MIS44_04395)	nhaC	820126..821508 (+)	1383	WP_249449305.1	Na+/H+ antiporter NhaC	-

Sequence

Protein

Download Length: 499 a.a. Molecular weight: 53563.51 Da Isoelectric Point: 7.5354

                                >NTDB_id=656667 MIS44_RS04375 WP_249449303.1 815066..816565(-) (comM) [Wielerella bovis strain 10LB456]

MSFALVNSRALSGMNAPLVEVEVHLANGLPQFNLVGLPDTEVKESRDRVRAAIIQSGFDFPAQKITVNLAPADLPKESAR

FDLPIAVGILAASAQIAPDVLADYEFAGELALSGALRSVRGALAMAWQGKQANRAFMLPQENVAAAAVIGDIRVFGASSL

SQVAAHLNGTQPLSPQRPPEFFRQPENTQLPDLRDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLAQRLPSILPPL

SDDELISVWALRSLLPNFSGCLNDARRPFRSPHHSASAAALVGGGSDPKPGEISLAHHGVLFLDELPEFDRKVLEMLREP

LESGEIHISRASRQATYPAQFQLVAAMNPCPCGYLGHPAKPCRCTPDAVQRYRDRISGPLLDRIDLTIEVPALPAADLIN

AQMGEDSATVLQRVQAARTKQLARQGKTNAALNPTELDTLANISPEAKNALGEMLEKLSLSARSFHRILRVARTLADLAG

DEVVTRAHVLRAIGFRRAL

Nucleotide

Download Length: 1500 bp

                                >NTDB_id=656667 MIS44_RS04375 WP_249449303.1 815066..816565(-) (comM) [Wielerella bovis strain 10LB456]

ATGAGCTTTGCCCTTGTCAATAGCCGCGCATTAAGTGGCATGAACGCACCTTTGGTAGAAGTGGAAGTCCATCTTGCCAA

CGGTTTGCCACAATTCAATCTGGTCGGCTTACCCGATACCGAAGTGAAGGAAAGCCGCGACCGTGTTCGTGCTGCCATCA

TTCAAAGTGGTTTTGATTTTCCTGCACAAAAAATTACCGTCAATCTTGCACCAGCCGATTTGCCCAAAGAATCCGCACGT

TTTGATTTACCGATTGCGGTGGGCATTCTCGCCGCATCGGCACAAATTGCGCCTGATGTGTTAGCAGATTATGAGTTTGC

AGGCGAGTTAGCATTATCGGGTGCGCTGCGTTCTGTGCGTGGTGCGTTGGCAATGGCGTGGCAAGGAAAACAAGCCAATC

GTGCGTTTATGTTGCCGCAGGAAAATGTTGCCGCAGCCGCTGTGATTGGCGACATTCGTGTATTTGGTGCCAGCAGTTTG

AGCCAAGTTGCCGCACATTTAAATGGCACACAACCTTTATCGCCACAACGTCCACCCGAATTTTTCAGGCAGCCTGAAAA

CACACAATTACCCGATTTACGCGATGTTAAAGGGCAACACACCGCGCGTTTAGCATTGGAAATTGCTGCGGCAGGCGGAC

ACAGTTTATTGATGATGGGTCCACCGGGGACGGGAAAATCCATGCTTGCGCAACGTTTGCCGTCTATTTTGCCGCCTTTA

TCCGATGACGAATTGATTTCCGTGTGGGCATTGCGTTCTTTGTTACCGAATTTTTCAGGCTGCCTGAACGATGCACGCCG

CCCGTTTCGCAGTCCACATCATTCTGCCAGCGCAGCCGCATTGGTTGGTGGTGGTTCAGACCCCAAACCTGGGGAAATTT

CTCTGGCGCATCACGGCGTATTATTTTTGGACGAGTTGCCTGAATTTGACCGCAAAGTATTGGAAATGTTGCGCGAACCA

TTGGAAAGTGGCGAAATTCATATTTCACGCGCCAGCCGACAAGCAACTTATCCTGCCCAATTTCAATTGGTTGCGGCGAT

GAATCCCTGTCCATGCGGTTATTTGGGACACCCAGCCAAACCTTGTCGCTGCACGCCCGATGCGGTGCAACGATACCGCG

ACCGCATTTCAGGTCCCTTGCTTGACCGCATTGATTTGACGATTGAAGTGCCTGCGCTACCTGCCGCCGATTTAATCAAC

GCGCAAATGGGCGAAGACAGCGCAACCGTGTTGCAACGTGTTCAGGCTGCCCGCACCAAACAATTGGCGCGACAAGGCAA

AACCAATGCCGCACTCAATCCCACCGAATTGGATACATTGGCAAATATCAGCCCCGAAGCCAAAAATGCACTGGGCGAAA

TGTTGGAAAAATTAAGTTTATCAGCACGAAGTTTTCATCGTATTTTGCGTGTAGCGCGAACATTGGCGGATTTGGCTGGC

GATGAAGTGGTAACACGCGCCCATGTTTTGCGTGCGATTGGATTTCGGCGCGCGTTGTAA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(404-496)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comM	Vibrio cholerae strain A1552	53.521	99.599	0.533
comM	Vibrio campbellii strain DS40M4	52.096	100	0.523
comM	Glaesserella parasuis strain SC1401	50.598	100	0.509
comM	Haemophilus influenzae Rd KW20	50.1	100	0.501
comM	Legionella pneumophila str. Paris	48.622	100	0.495
comM	Legionella pneumophila strain ERS1305867	48.622	100	0.495
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.2	100	0.433

Detailed information NTG0656667