Detailed information NTG0656049

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LN244_RS15895
• Genome accession: NZ_CP092123
• Coordinates: 3457198..3458712 (-)
• Length: 504 a.a.
• NCBI ID: WP_239040729.1
• Uniprot ID: -
• Organism: Marinobacterium sediminicola strain 1.7287
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 3452198..3463712

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LN244_RS15880 (LN244_15880)	-	3452302..3453681 (+)	1380	WP_239040726.1	TRAP transporter large permease subunit	-
LN244_RS15885 (LN244_15885)	rep	3453747..3455762 (-)	2016	WP_239040727.1	DNA helicase Rep	-
LN244_RS15890 (LN244_15890)	-	3456000..3457229 (+)	1230	WP_239040728.1	EAL domain-containing protein	-
LN244_RS15895 (LN244_15895)	comM	3457198..3458712 (-)	1515	WP_239040729.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
LN244_RS15900 (LN244_15900)	-	3458751..3459056 (-)	306	WP_239040730.1	accessory factor UbiK family protein	-
LN244_RS15905 (LN244_15905)	glnK	3459349..3459687 (+)	339	WP_239040731.1	P-II family nitrogen regulator	-
LN244_RS15910 (LN244_15910)	-	3459731..3461005 (+)	1275	WP_239040732.1	ammonium transporter	-
LN244_RS15915 (LN244_15915)	glnK	3461147..3461485 (+)	339	WP_106591655.1	P-II family nitrogen regulator	-
LN244_RS15920 (LN244_15920)	-	3461539..3461694 (-)	156	WP_239040733.1	entericidin A/B family lipoprotein	-
LN244_RS15925 (LN244_15925)	astA	3461812..3462849 (+)	1038	WP_239040734.1	arginine N-succinyltransferase	-

Sequence

Protein

• Length: 504 a.a.
• Molecular weight: 53553.72 Da
• Isoelectric Point: 7.4354

>NTDB_id=656049 LN244_RS15895 WP_239040729.1 3457198..3458712(-) (comM) [Marinobacterium sediminicola strain 1.7287]
MSLAVIHTRAQLGIEAPPVAVEVHLSGGLPSMSIVGLPETAVKESRERVRSALINAGFDFPQRRVTINLAPADLPKEGGR
YDLAIAIGILSASGQLKGWKASTTVEVIGELALSGDIRPVRGILPAAVAAGRIGRSLVVARENADEAVMAEGTEIFAASH
LLELVAHLTRQQPLAAVVAGECTERVHSVPDLADVKGQLQARRALEVAAAGGHNLLFSGPPGSGKSMLASRLPSLLPPLD
VAQRLEVAAIASVSGQSVAPACAGVRPFRSPHHTASAIALVGGGSHPRPGEISLAHQGVLFLDELPEFPRRVLEVLREPL
ETGEILISRAARQTRYPARFQLIAAMNPCPCGYHDDGSDRCICTPDQIRRYQMKISGPLLDRIDLQLQVPALPVETLLQS
ATAGESSAAVRQRVIIALERQLERQGCMNRELSGAELEQVCRLDSATEALLVRVMQQSQLSARGCHRLLRVARTLADLAG
QADVGREQLLEALAFRGLAGGGWC

Nucleotide

• Length: 1515 bp

>NTDB_id=656049 LN244_RS15895 WP_239040729.1 3457198..3458712(-) (comM) [Marinobacterium sediminicola strain 1.7287]
ATGTCGCTTGCCGTAATTCATACCCGGGCTCAGCTCGGTATCGAAGCACCTCCCGTTGCAGTTGAGGTGCATCTGTCCGG
AGGCTTGCCCTCCATGTCGATCGTGGGGCTGCCTGAAACCGCAGTCAAGGAAAGTCGTGAGCGGGTGCGTAGCGCGCTCA
TCAACGCAGGTTTCGACTTTCCGCAACGCCGCGTCACCATCAACCTGGCACCGGCGGACCTGCCCAAGGAGGGTGGTCGT
TATGATCTGGCCATTGCCATTGGTATCCTCTCGGCGTCCGGTCAGCTGAAGGGCTGGAAGGCGAGCACAACCGTGGAGGT
GATCGGTGAGCTGGCGCTGTCCGGTGATATCCGTCCGGTGCGCGGCATTCTGCCTGCCGCCGTTGCTGCCGGTCGGATCG
GTCGCTCGCTGGTCGTCGCCAGGGAAAATGCTGATGAAGCGGTGATGGCAGAAGGTACAGAGATATTTGCAGCCAGTCAT
CTGCTGGAACTGGTCGCTCACCTGACGCGGCAACAGCCGCTGGCTGCTGTGGTTGCCGGTGAATGCACTGAAAGAGTGCA
TTCGGTGCCGGACCTGGCGGATGTCAAAGGCCAGTTGCAGGCCCGTCGGGCCTTGGAAGTGGCGGCCGCGGGTGGGCATA
ACCTGCTTTTTTCAGGGCCTCCGGGGAGCGGTAAGAGCATGCTGGCTTCGCGTTTGCCAAGCCTGTTACCGCCACTGGAT
GTGGCACAGCGACTGGAAGTGGCGGCAATCGCATCCGTTTCGGGTCAGAGTGTGGCCCCGGCCTGTGCCGGGGTTCGGCC
TTTCCGTAGCCCGCACCATACCGCATCGGCCATCGCCCTGGTTGGCGGTGGCAGTCACCCTCGGCCAGGCGAGATCTCTT
TGGCCCATCAGGGCGTGCTGTTTCTTGATGAACTCCCCGAGTTTCCTCGCAGGGTGCTGGAAGTGTTACGTGAGCCTCTG
GAAACCGGCGAGATTCTGATTTCAAGGGCGGCACGACAGACCCGCTATCCGGCTCGGTTCCAGCTCATAGCGGCCATGAA
TCCCTGCCCTTGCGGCTACCACGATGATGGCAGTGACCGCTGTATCTGCACGCCGGATCAGATTCGTCGATACCAGATGA
AGATTTCGGGGCCCTTGCTCGACCGCATTGATCTGCAACTTCAGGTGCCGGCGTTGCCAGTCGAAACCCTGCTGCAATCG
GCAACGGCGGGGGAGTCCAGTGCCGCTGTGCGGCAACGTGTGATCATTGCACTGGAGCGTCAACTTGAGCGGCAGGGTTG
CATGAACCGCGAGCTGTCGGGGGCAGAACTGGAACAGGTATGCAGGCTGGACAGTGCAACTGAGGCTCTGCTGGTCAGAG
TGATGCAGCAGAGTCAGCTATCGGCTCGGGGCTGTCATCGGTTGTTGCGAGTCGCCCGTACCCTGGCCGATCTGGCGGGA
CAGGCGGATGTCGGGCGTGAGCAGTTGCTGGAGGCGTTGGCGTTCAGAGGGCTTGCTGGCGGCGGTTGGTGTTGA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-395)

• Subunit ChlI of Mg-chelatase (ChlI) (21-143)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (404-496)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	54.016	98.81	0.534
comM	Glaesserella parasuis strain SC1401	50.696	99.802	0.506
comM	Vibrio campbellii strain DS40M4	50.803	98.81	0.502
comM	Legionella pneumophila strain ERS1305867	50.704	98.611	0.5
comM	Legionella pneumophila str. Paris	50.704	98.611	0.5
comM	Haemophilus influenzae Rd KW20	49.004	99.603	0.488
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.444	100	0.44