Detailed information NTG0655746

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: HP572_RS18865
• Genome accession: NZ_CP092070
• Coordinates: 4194961..4196487 (+)
• Length: 508 a.a.
• NCBI ID: WP_240584022.1
• Uniprot ID: -
• Organism: Pectobacterium sp. PL64
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 4189961..4201487

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HP572_RS18845 (HP572_18845)	-	4191398..4192324 (-)	927	WP_095700894.1	branched-chain amino acid transaminase	-
HP572_RS18850 (HP572_18850)	ilvM	4192349..4192609 (-)	261	WP_010294673.1	acetolactate synthase 2 small subunit	-
HP572_RS18855 (HP572_18855)	ilvG	4192668..4194314 (-)	1647	WP_240584021.1	acetolactate synthase 2 catalytic subunit	-
HP572_RS18860 (HP572_18860)	ilvL	4194455..4194553 (-)	99	WP_071531109.1	ilv operon leader peptide	-
HP572_RS18865 (HP572_18865)	comM	4194961..4196487 (+)	1527	WP_240584022.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
HP572_RS18870 (HP572_18870)	-	4196545..4196883 (-)	339	WP_010283921.1	DUF413 domain-containing protein	-
HP572_RS18875 (HP572_18875)	hdfR	4197004..4197831 (+)	828	WP_010294681.1	HTH-type transcriptional regulator HdfR	-
HP572_RS18880 (HP572_18880)	yjfF	4197853..4198815 (-)	963	WP_095700899.1	galactofuranose ABC transporter, permease protein YjfF	-
HP572_RS18885 (HP572_18885)	ytfT	4198815..4199825 (-)	1011	WP_240584023.1	galactofuranose ABC transporter, ATP-binding protein YtfT	-
HP572_RS18890 (HP572_18890)	ytfR	4199812..4201332 (-)	1521	WP_240584024.1	galactofuranose ABC transporter, ATP-binding protein YtfR	-

Sequence

Protein

• Length: 508 a.a.
• Molecular weight: 55453.18 Da
• Isoelectric Point: 6.6906

>NTDB_id=655746 HP572_RS18865 WP_240584022.1 4194961..4196487(+) (comM) [Pectobacterium sp. PL64]
MSLAVTYTRAMIGVQAPDVYIEVHISSGLPALTLVGLPETTVKEARDRVRSALINCGFTFPAKRITVNLAPADLPKEGGR
YDLPIALAILAASEQIDGEKLSRYEFLGELGLSGTLRGVNGAIPAALEAIKAGRQLVLPDDNKREMTLIPQGEALMAGHL
LDVCAFLSGEEELLSCSDIMPIPPIEEDTLDLKDIIGQEQAKRALEIAAAGGHNLLLLGPPGTGKTMLASRLGNLMPPLS
DEEALESAAINSLINIDATMTRWRARPFRAPHHSSSMAALVGGGSLPKPGEISLAHNGVLFLDELPEFERRVLDSLREPL
ESGEIIISRTRAKVCYPARVQLVAAMNPSPSGHYQGVHNRLPAQQILRYLSKLSGPFLDRFDLSIEVPLLPPGVLSQQHY
QGESSATIRDRVLIARQIQLKRANKINALLTSREIEKHCGLEMADATYLEEVMNKLGLSVRAWHRILKVARTIADLGGRD
NIERKHLAEALSYRCMDRLLIQLHKSLE

Nucleotide

• Length: 1527 bp

>NTDB_id=655746 HP572_RS18865 WP_240584022.1 4194961..4196487(+) (comM) [Pectobacterium sp. PL64]
ATGTCATTGGCAGTTACCTATACTCGGGCAATGATTGGCGTACAAGCGCCTGACGTTTATATCGAAGTTCACATCAGCAG
CGGGCTACCGGCCCTAACGCTGGTGGGTTTACCAGAAACCACCGTCAAGGAAGCACGCGATCGCGTGCGCAGCGCACTTA
TCAATTGCGGATTTACGTTTCCAGCAAAGCGCATCACGGTCAACCTCGCCCCCGCAGACCTGCCAAAAGAAGGAGGACGC
TACGATCTGCCGATTGCTCTGGCGATTCTGGCGGCCTCAGAACAAATCGATGGTGAAAAGCTAAGCCGCTACGAATTTCT
TGGCGAACTCGGCCTGTCTGGCACCTTACGTGGCGTCAATGGCGCAATTCCCGCCGCATTGGAAGCCATAAAAGCAGGCC
GTCAGCTTGTCCTGCCAGATGATAATAAACGGGAGATGACGCTGATACCGCAGGGCGAAGCGCTGATGGCCGGGCATTTG
TTGGACGTGTGTGCTTTTCTCAGTGGAGAAGAGGAATTGCTCAGTTGCTCTGACATAATGCCCATTCCACCGATCGAGGA
AGATACGCTCGATCTGAAAGATATCATCGGTCAGGAGCAGGCTAAACGCGCGTTGGAAATCGCGGCGGCAGGCGGTCACA
ACCTGCTCTTGCTGGGGCCACCGGGAACCGGGAAAACCATGCTGGCGAGCCGATTAGGCAATCTGATGCCGCCATTAAGC
GATGAAGAAGCGCTGGAAAGCGCCGCCATCAATAGCCTAATCAACATTGATGCCACCATGACGCGCTGGCGAGCCAGACC
ATTCAGAGCGCCTCACCATAGTTCCTCCATGGCGGCGCTCGTGGGCGGAGGGTCGCTGCCCAAACCGGGAGAAATCTCGC
TCGCCCACAACGGTGTACTATTTTTGGACGAATTACCGGAGTTTGAGCGACGCGTACTGGACTCACTACGAGAGCCTTTG
GAGTCCGGTGAAATTATCATTTCCCGTACTCGGGCTAAAGTGTGTTACCCAGCACGGGTGCAGCTCGTCGCCGCAATGAA
TCCCAGTCCCTCAGGACACTATCAGGGCGTTCATAACCGGTTGCCAGCACAACAAATACTGCGCTATCTCAGCAAACTTT
CCGGTCCCTTTTTGGATCGCTTTGACCTTTCAATCGAAGTCCCTTTGCTACCACCAGGGGTTTTATCTCAGCAGCATTAT
CAAGGCGAAAGCAGCGCGACAATTCGCGATCGCGTGCTGATTGCAAGGCAGATACAGCTGAAGCGGGCAAATAAAATCAA
CGCACTACTCACTTCACGTGAAATAGAAAAACACTGCGGATTGGAGATGGCTGATGCGACCTATTTGGAAGAGGTGATGA
ACAAACTTGGCTTATCCGTACGTGCATGGCACAGGATATTGAAAGTCGCGCGCACGATCGCTGACCTCGGCGGTCGGGAT
AATATTGAAAGAAAACACCTTGCCGAAGCGCTGAGCTATCGCTGTATGGATCGATTGCTCATCCAACTCCACAAAAGCCT
TGAATAG

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-390)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-494)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	64.158	99.409	0.638
comM	Haemophilus influenzae Rd KW20	63.834	99.606	0.636
comM	Glaesserella parasuis strain SC1401	63.261	100	0.634
comM	Vibrio campbellii strain DS40M4	62.846	99.606	0.626
comM	Legionella pneumophila str. Paris	50	98.819	0.494
comM	Legionella pneumophila strain ERS1305867	50	98.819	0.494
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	46.214	100	0.469