Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   MBG98_RS03140 Genome accession   NZ_CP092038
Coordinates   661709..663220 (-) Length   503 a.a.
NCBI ID   WP_027224563.1    Uniprot ID   A0AAP3HBJ3
Organism   Legionella pneumophila strain 11052018-5     
Function   DNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 656709..668220
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MBG98_RS03105 (MBG98_03105) - 656719..657390 (-) 672 WP_011213193.1 TIGR00153 family protein -
  MBG98_RS03110 (MBG98_03110) - 657581..658345 (+) 765 WP_010946322.1 hypothetical protein -
  MBG98_RS03115 (MBG98_03115) - 658636..659199 (+) 564 WP_027224560.1 YqgE/AlgH family protein -
  MBG98_RS03120 (MBG98_03120) ruvX 659192..659611 (+) 420 WP_016356737.1 Holliday junction resolvase RuvX -
  MBG98_RS03125 (MBG98_03125) - 659661..660554 (+) 894 WP_027224561.1 aspartate carbamoyltransferase catalytic subunit -
  MBG98_RS03130 (MBG98_03130) - 660610..660936 (-) 327 WP_011945754.1 hypothetical protein -
  MBG98_RS03135 (MBG98_03135) - 661219..661605 (-) 387 WP_027224562.1 hypothetical protein -
  MBG98_RS03140 (MBG98_03140) comM 661709..663220 (-) 1512 WP_027224563.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  MBG98_RS03145 (MBG98_03145) ubiK 663285..663545 (-) 261 WP_011213199.1 ubiquinone biosynthesis accessory factor UbiK -
  MBG98_RS03150 (MBG98_03150) - 663690..664028 (+) 339 WP_011213200.1 P-II family nitrogen regulator -
  MBG98_RS03155 (MBG98_03155) - 664038..664619 (-) 582 WP_014843440.1 5-formyltetrahydrofolate cyclo-ligase -
  MBG98_RS03160 (MBG98_03160) - 664866..665051 (+) 186 WP_010946331.1 PA3496 family putative envelope integrity protein -
  MBG98_RS03165 (MBG98_03165) - 665065..665880 (+) 816 WP_010946332.1 aminotransferase class IV -
  MBG98_RS03170 (MBG98_03170) - 665907..666590 (-) 684 WP_050598157.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 503 a.a.        Molecular weight: 55005.63 Da        Isoelectric Point: 8.0870

>NTDB_id=655278 MBG98_RS03140 WP_027224563.1 661709..663220(-) (comM) [Legionella pneumophila strain 11052018-5]
MSLAFTKTRSTIGIVAQPVSVEVHLSNGLPSFTMVGLAETAVKESKDRVRSAIINSQFEFPCRKITVNLGPANLPKTGSG
FDLPIALGILAASEQIPLTNLANHEFIGELALSGELRGVSAIIPAVLAAHKDNQHLIIANANAAEASLTGHQKVFTANNL
REVCDYLCQGTSLQNLPPKPNLLLNNHELDWSDIKGQHHAKNAMVIAACGGHSILLSGAPGSGKTMMAKRFSTLLPELSE
TQALECAAINSIRGKLPDFREWRLPPFRAPHHTASPVALVGGGNPPKPGEISLAHHGVLFLDELPEFNRQVLETLREPLE
SGHICISRAAAQIEFPAKFQLIAAMNPCPCGQWGNSQANCMCTPDRISRYLAKLSAPLLDRIDMQVTIHALSQEELIKPN
THLEKQSPAIREKVTKMHEIQMARQDSLNANLNSKTCEMVCELGSEEQLFLREVMSKLKLSARGYHRLLKVSRTIADMNE
CNKVMLNHLQQALSYKQILHLPK

Nucleotide


Download         Length: 1512 bp        

>NTDB_id=655278 MBG98_RS03140 WP_027224563.1 661709..663220(-) (comM) [Legionella pneumophila strain 11052018-5]
ATGAGTCTCGCATTTACCAAAACGCGAAGTACTATTGGTATTGTCGCACAACCAGTATCTGTGGAAGTCCATTTATCAAA
TGGATTGCCAAGTTTTACTATGGTAGGACTTGCTGAAACAGCAGTGAAAGAAAGTAAAGACCGCGTGCGCAGCGCCATTA
TAAATAGCCAATTCGAATTTCCATGCCGTAAAATTACTGTTAATCTTGGCCCTGCCAATTTACCTAAAACGGGAAGTGGC
TTTGACTTGCCTATTGCACTAGGGATACTCGCAGCATCGGAACAAATCCCTCTCACCAACCTTGCAAACCACGAATTTAT
TGGAGAATTGGCTTTAAGCGGCGAGCTTAGAGGGGTTTCTGCCATTATACCTGCTGTTCTTGCCGCTCATAAAGACAATC
AACATCTGATTATAGCGAATGCCAATGCTGCCGAAGCTTCTTTAACCGGCCATCAAAAAGTCTTTACTGCCAATAACTTA
CGCGAAGTTTGTGATTATCTATGCCAGGGTACTTCTTTACAGAACTTACCTCCCAAACCAAATCTTTTATTAAATAACCA
TGAATTGGATTGGTCTGATATTAAGGGGCAACATCATGCCAAAAATGCTATGGTCATTGCTGCCTGTGGGGGACACAGCA
TTCTGCTAAGTGGCGCACCAGGCAGTGGAAAAACGATGATGGCAAAAAGATTTAGTACCTTGCTACCTGAGCTATCCGAA
ACACAAGCTCTCGAGTGCGCAGCCATTAATTCAATTCGAGGCAAATTACCTGATTTCAGGGAATGGCGTTTGCCCCCTTT
TCGTGCACCACATCATACTGCTTCACCTGTCGCGTTAGTCGGAGGAGGCAACCCGCCGAAACCTGGTGAAATTTCATTAG
CCCATCACGGCGTATTATTTTTAGATGAATTACCTGAATTTAATCGGCAAGTATTGGAGACACTTAGAGAACCTTTGGAG
TCAGGGCATATTTGCATTTCCAGGGCAGCTGCACAAATAGAGTTTCCTGCCAAATTTCAATTAATTGCAGCAATGAATCC
TTGCCCTTGTGGCCAATGGGGTAATTCACAAGCCAATTGCATGTGTACTCCTGATAGAATCAGCCGCTATTTGGCAAAAC
TTTCTGCTCCATTATTAGATAGAATCGATATGCAGGTTACAATTCACGCATTATCTCAAGAGGAGTTAATTAAACCCAAT
ACCCATTTAGAAAAACAAAGTCCTGCTATTAGAGAAAAGGTAACAAAGATGCATGAAATACAAATGGCACGACAAGATAG
TCTCAATGCCAATTTAAATTCCAAAACATGCGAAATGGTTTGCGAATTGGGATCAGAAGAACAATTGTTTCTCCGGGAAG
TGATGAGTAAACTGAAACTGTCTGCTCGTGGTTACCATCGCTTGCTAAAAGTAAGCAGGACAATTGCTGATATGAATGAA
TGTAATAAGGTCATGCTAAACCATCTGCAACAGGCGTTATCCTATAAACAAATCTTGCATTTGCCTAAATAA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(190-395)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(405-496)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Legionella pneumophila str. Paris

98.012

100

0.98
  comM Legionella pneumophila strain ERS1305867

98.012

100

0.98
  comM Haemophilus influenzae Rd KW20

50.394

100

0.509
  comM Vibrio cholerae strain A1552

50.298

100

0.503
  comM Vibrio campbellii strain DS40M4

50

100

0.501
  comM Glaesserella parasuis strain SC1401

47.732

100

0.481
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

42.369

99.006

0.419