Detailed information NTG0653792

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: K5M76_RS01630
• Genome accession: NZ_CP091833
• Coordinates: 372904..374430 (-)
• Length: 508 a.a.
• NCBI ID: WP_099457106.1
• Uniprot ID: -
• Organism: Shewanella xiamenensis strain HD6452
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 367904..379430

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5M76_RS01605 (K5M76_01605)	prpB	368355..369233 (-)	879	WP_037431229.1	methylisocitrate lyase	-
K5M76_RS01610 (K5M76_01610)	-	369298..370086 (-)	789	WP_099457108.1	GntR family transcriptional regulator	-
K5M76_RS01615 (K5M76_01615)	-	370419..370883 (+)	465	WP_099457107.1	DUF523 domain-containing protein	-
K5M76_RS01620 (K5M76_01620)	-	370952..371893 (-)	942	WP_037431237.1	acyltransferase	-
K5M76_RS01625 (K5M76_01625)	-	371901..372803 (-)	903	WP_037413712.1	acyltransferase	-
K5M76_RS01630 (K5M76_01630)	comM	372904..374430 (-)	1527	WP_099457106.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
K5M76_RS01635 (K5M76_01635)	-	374646..375791 (+)	1146	WP_099457105.1	DUF1963 domain-containing protein	-
K5M76_RS01640 (K5M76_01640)	-	375797..376393 (-)	597	WP_099457104.1	response regulator transcription factor	-
K5M76_RS01645 (K5M76_01645)	-	376393..377472 (-)	1080	WP_099457103.1	sensor histidine kinase	-
K5M76_RS01650 (K5M76_01650)	-	377557..378261 (-)	705	WP_099457102.1	hypothetical protein	-
K5M76_RS01655 (K5M76_01655)	-	378447..379397 (-)	951	WP_037413700.1	calcium/sodium antiporter	-

Sequence

Protein

• Length: 508 a.a.
• Molecular weight: 55252.72 Da
• Isoelectric Point: 7.9847

>NTDB_id=653792 K5M76_RS01630 WP_099457106.1 372904..374430(-) (comM) [Shewanella xiamenensis strain HD6452]
MAIACVHTRASCGVEAPEVTVEVHLSNGLPAFNLVGLPEASVKEARERVRSALINAGFEFPMRRITVNLAPADLPKQGGR
YDLPIAIGILAASEQIPATSLKDTEFVGELALSGQIRHCQGLLPAIIAAKRHNNQLILPLDNRHDAELVGYPKVYFGSHL
QSLAAFLHGQAPLPMLEQQLEWISDEPAQSTPCLSEVIGQYQAKQALEIAAAGNHNLLMLGPPGTGKTMLASRMMALLPA
LNYEEALEVAAIHSVAGINIKPQDFLKRPFRAPHHTCSSISLVGGGSIPKPGEISLAHRGVLFLDEVAEFPRKVLDCLRE
PMETGEVVISRAAAKLTFLSRFQLIAAMNPSPSGDIDGPNRATPDQIQRYLARLSGPFIDRFDLTIEVPKLPAGTLTQQS
TQGETSHQIAKRVKCARDIQLARAGVLNSELSGKQLKQFSGINDADLVFLEQSVVKLGLSVRSFHRIQRVARTIADLEQA
PNTERRHLAQALGYRAMDKLLARLSQQY

Nucleotide

• Length: 1527 bp

>NTDB_id=653792 K5M76_RS01630 WP_099457106.1 372904..374430(-) (comM) [Shewanella xiamenensis strain HD6452]
ATGGCGATAGCCTGTGTACATACCCGAGCCAGTTGTGGTGTTGAAGCTCCAGAAGTCACGGTTGAAGTCCATCTCAGTAA
TGGCCTACCCGCCTTTAATCTGGTGGGTTTGCCAGAAGCCTCAGTCAAAGAAGCCCGTGAGCGGGTGCGCAGTGCCCTGA
TCAATGCGGGATTCGAGTTTCCGATGCGCCGGATAACCGTCAATCTCGCCCCCGCAGATTTACCCAAACAGGGCGGCCGT
TACGATTTGCCTATCGCCATCGGCATTCTAGCCGCGTCAGAGCAAATCCCCGCCACGAGCCTTAAGGATACTGAATTTGT
CGGCGAACTTGCCCTCTCAGGGCAAATCCGCCACTGCCAAGGATTACTACCAGCAATCATTGCGGCTAAACGCCATAATA
ATCAGTTAATTCTGCCACTCGATAATCGCCACGATGCCGAGTTAGTTGGCTATCCTAAGGTCTACTTTGGCTCCCATTTG
CAAAGTTTAGCGGCGTTTCTCCATGGACAAGCGCCACTCCCCATGCTGGAGCAGCAGCTCGAGTGGATCTCGGATGAGCC
GGCGCAGTCCACGCCTTGCCTTAGCGAGGTGATAGGTCAATACCAAGCTAAACAAGCACTTGAAATCGCCGCTGCAGGCA
ACCATAACCTATTAATGCTAGGCCCGCCGGGTACTGGCAAAACCATGCTAGCCAGCCGCATGATGGCGCTATTACCTGCA
CTCAATTATGAAGAAGCCTTAGAAGTGGCTGCAATTCATTCCGTCGCGGGCATCAATATCAAACCGCAGGACTTTCTTAA
GCGACCATTTCGCGCGCCGCACCATACTTGCTCCTCAATTTCCTTAGTCGGAGGTGGCAGTATTCCTAAGCCTGGCGAAA
TTTCATTGGCCCATCGCGGAGTATTATTTCTGGATGAAGTCGCTGAATTTCCAAGAAAAGTGCTCGACTGTTTGCGTGAA
CCGATGGAAACAGGTGAAGTGGTGATCTCCCGCGCGGCGGCAAAACTGACCTTTTTAAGCCGCTTTCAATTGATCGCCGC
CATGAACCCCAGCCCGAGCGGCGATATCGACGGCCCCAATCGAGCTACACCCGATCAAATCCAGCGCTATCTCGCCAGAC
TCTCTGGCCCGTTTATAGATAGATTTGATCTCACCATCGAAGTCCCCAAACTCCCCGCAGGCACCCTAACGCAACAGTCG
ACGCAAGGCGAAACCAGCCATCAAATCGCCAAACGAGTAAAATGCGCCCGCGATATTCAACTCGCCAGAGCGGGCGTGCT
TAACAGCGAACTATCAGGTAAACAACTTAAGCAATTTAGTGGTATCAATGATGCTGACCTAGTTTTTTTAGAACAGAGTG
TCGTCAAGTTAGGATTATCCGTGCGCAGCTTTCATCGTATTCAACGGGTTGCCCGCACCATTGCCGACCTTGAGCAGGCC
CCCAATACCGAAAGACGCCACCTCGCCCAAGCCTTAGGATATCGGGCTATGGATAAATTATTGGCCCGTTTATCCCAACA
GTATTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (403-495)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (194-393)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	56.805	99.803	0.567
comM	Vibrio cholerae strain A1552	56.102	100	0.561
comM	Glaesserella parasuis strain SC1401	55.731	99.606	0.555
comM	Vibrio campbellii strain DS40M4	54.921	100	0.549
comM	Legionella pneumophila str. Paris	46.85	100	0.469
comM	Legionella pneumophila strain ERS1305867	46.85	100	0.469
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	43.738	99.016	0.433