Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG860_RS18400 Genome accession   NZ_CP108076
Coordinates   4091331..4092455 (+) Length   374 a.a.
NCBI ID   WP_328480458.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00267     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4086331..4097455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG860_RS18385 (OG860_18370) - 4086981..4087760 (+) 780 WP_328484555.1 hypothetical protein -
  OG860_RS18390 (OG860_18375) - 4087813..4089564 (-) 1752 WP_328480456.1 hypothetical protein -
  OG860_RS18395 (OG860_18380) radA/sms 4089841..4091250 (+) 1410 WP_328480457.1 DNA repair protein RadA Machinery gene
  OG860_RS18400 (OG860_18385) disA 4091331..4092455 (+) 1125 WP_328480458.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG860_RS18405 (OG860_18390) - 4092626..4093492 (-) 867 WP_328480459.1 hypothetical protein -
  OG860_RS18410 (OG860_18395) - 4093754..4094686 (+) 933 WP_328480460.1 A/G-specific adenine glycosylase -
  OG860_RS18415 (OG860_18400) - 4094987..4095529 (+) 543 WP_190149519.1 SigE family RNA polymerase sigma factor -
  OG860_RS18420 (OG860_18405) - 4095514..4096173 (+) 660 WP_328480461.1 hypothetical protein -
  OG860_RS18425 (OG860_18410) cseB 4096446..4097147 (+) 702 WP_328480462.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40015.82 Da        Isoelectric Point: 5.0025

>NTDB_id=652829 OG860_RS18400 WP_328480458.1 4091331..4092455(+) (disA) [Streptomyces sp. NBC_00267]
MAANDRAAAPGKSGGSSGAEGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLNVEFAATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPMIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELDALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=652829 OG860_RS18400 WP_328480458.1 4091331..4092455(+) (disA) [Streptomyces sp. NBC_00267]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCGGTGCCGAGGGCCTGATGCGCGCCGCGCT
GAGCGCGGTGGCTCCCGGCACGGCCCTGCGTGACGGACTGGAACGGATCCTCCGCGGCAACACCGGCGGGCTCATCGTGC
TGGGCTCCGACAAGACGGTCGAGGCGATGTGTACGGGCGGGTTCGTCCTGAACGTGGAGTTCGCGGCCACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCGGACCTGTCGAAGATCCTGCGGGCCGGCGTCCAGCTGGTACC
GGACCCCATGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCCG
TGGTCTCGGTCTCCCAGTCCATGCGGCTGATCGCCCTCTACGTCGACGGGCAGCGCCGCGTCCTGGAGGATTCCGCGGCG
ATCCTGTCCCGTGCGAACCAGGCACTGGCGACCCTCGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTCTCCGCGGTGGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGCCGTCTGCTCGCCCTTCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGGTCCGGGACTACGTGCCGGAACCCACGGCGAAGCGGTCCCGCACGGTCGACGA
GGCGCTGTACGAGCTGGACGCGCTCAGCCACGCCGAACTGCTCGAACTCTCCACGGTGGCCCGCGCGTTGGGTTACACCG
GCTCCCCCGAGGCACTGGACTCGGCGGTCTCGCCCCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGCCTGCCGGGTGCC
ATCATCGACCGGCTCGTCGAGCACTTCGGCGGACTCCAGAAGCTCCTCGCCGCGAGTGTCGACGACCTCCAGACGGTGGA
CGGCGTGGGCGAGGCAAGGGCCCGCAGCGTCCGCGAGGGCCTGTCAAGGCTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.286

93.583

0.433