Detailed information NTG0652204

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: L3503_RS06400
• Genome accession: NZ_CP091528
• Coordinates: 1365822..1367972 (-)
• Length: 716 a.a.
• NCBI ID: WP_021731916.1
• Uniprot ID: I6TUT8
• Organism: Lactiplantibacillus paraplantarum strain KCCM 11826P
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1360822..1372972

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L3503_RS06370 (L3503_06370)	-	1361004..1361207 (-)	204	WP_033609515.1	hypothetical protein	-
L3503_RS06375 (L3503_06375)	-	1361363..1362049 (-)	687	WP_021731911.1	CPBP family intramembrane glutamic endopeptidase	-
L3503_RS06380 (L3503_06380)	-	1362145..1362825 (-)	681	WP_033609516.1	CPBP family intramembrane glutamic endopeptidase	-
L3503_RS06385 (L3503_06385)	-	1362913..1363581 (-)	669	WP_021731913.1	CPBP family intramembrane glutamic endopeptidase	-
L3503_RS06390 (L3503_06390)	-	1363649..1364338 (-)	690	WP_021731914.1	CPBP family intramembrane glutamic endopeptidase	-
L3503_RS06395 (L3503_06395)	-	1364429..1365805 (-)	1377	WP_021731915.1	HlyD family secretion protein	-
L3503_RS06400 (L3503_06400)	comA	1365822..1367972 (-)	2151	WP_021731916.1	peptide cleavage/export ABC transporter	Regulator
L3503_RS06405 (L3503_06405)	plnE	1368238..1368408 (+)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
L3503_RS06410 (L3503_06410)	plnF	1368433..1368591 (+)	159	WP_033609517.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
L3503_RS06415 (L3503_06415)	-	1368685..1369458 (+)	774	WP_021731918.1	CPBP family intramembrane glutamic endopeptidase	-
L3503_RS06420 (L3503_06420)	-	1369762..1370505 (-)	744	WP_021731919.1	response regulator transcription factor	-
L3503_RS06425 (L3503_06425)	-	1370625..1371368 (-)	744	WP_021731920.1	LytTR family transcriptional regulator DNA-binding domain-containing protein	-
L3503_RS06430 (L3503_06430)	-	1371369..1372697 (-)	1329	WP_033609518.1	sensor histidine kinase	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 79998.75 Da
• Isoelectric Point: 6.6531

>NTDB_id=652204 L3503_RS06400 WP_021731916.1 1365822..1367972(-) (comA) [Lactiplantibacillus paraplantarum strain KCCM 11826P]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFEVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAMVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAVLSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHVALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=652204 L3503_RS06400 WP_021731916.1 1365822..1367972(-) (comA) [Lactiplantibacillus paraplantarum strain KCCM 11826P]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAGACGAGTTTGGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGAGGTCCAAGATTTACCATTG
CCATTTATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTTGTTGTAAAAACCTCAAAAACGCATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGTTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCCAATAATATGCACAGTACATTGGCGATGGTGGCGATTGGTCTAATTGTTTTTT
ATACTTTTCAAGCTATTTTTACTTATGCCCAGAATTTTTTGTTGGCGGTTTTAGGCCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACCCGGCGGACGGGTGAAATTGTTTCACGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAAAGCAATGCTGTTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTGGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTGTGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAACTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTGAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAACGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTGGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGCGGCTCTGGCAAGTCCACGTTAGTTAAGTTACTTATTGATTTTTATCAGC
CGAATAGTGGTGATGTCATATTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATATATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCAGCCCAAGTC
TTGATATTTGATGAGTCGACAAGTGGACTGGATGCAATTACTGAAAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCGAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGTAGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterProScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

• ABC transporter (ABC_tran) (498-648)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.906	99.581	0.587
comA	Streptococcus pneumoniae Rx1	58.626	99.581	0.584
comA	Streptococcus pneumoniae D39	58.626	99.581	0.584
comA	Streptococcus pneumoniae R6	58.626	99.581	0.584
comA	Streptococcus pneumoniae TIGR4	58.485	99.581	0.582
comA	Streptococcus mitis SK321	58.345	99.581	0.581
comA	Streptococcus gordonii str. Challis substr. CH1	57.242	100	0.574
comA/nlmT	Streptococcus mutans UA159	54.875	100	0.55