Detailed information NTG0651320

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: L3475_RS05900
• Genome accession: NZ_CP091451
• Coordinates: 1161112..1162065 (-)
• Length: 317 a.a.
• NCBI ID: WP_000495909.1
• Uniprot ID: A0A0H2UPP6
• Organism: Streptococcus pneumoniae strain 3238/09
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1156112..1167065

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L3475_RS05875 (L3475_05830)	-	1156593..1156688 (-)	96	Protein_1166	IS630 family transposase	-
L3475_RS05880 (L3475_05835)	-	1157101..1157442 (+)	342	Protein_1167	transposase	-
L3475_RS05885 (L3475_05840)	prsA	1157559..1158500 (-)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
L3475_RS05890 (L3475_05845)	-	1158567..1159280 (-)	714	WP_000230400.1	O-methyltransferase	-
L3475_RS05895 (L3475_05850)	pepF	1159282..1161093 (-)	1812	WP_000244158.1	oligoendopeptidase F	Regulator
L3475_RS05900 (L3475_05855)	coiA	1161112..1162065 (-)	954	WP_000495909.1	competence protein CoiA	Machinery gene
L3475_RS05905 (L3475_05860)	tehB	1162138..1162998 (-)	861	WP_000413757.1	SAM-dependent methyltransferase TehB	-
L3475_RS05910 (L3475_05865)	smpB	1163014..1163481 (-)	468	WP_001051750.1	SsrA-binding protein SmpB	-
L3475_RS05915 (L3475_05870)	rnr	1163444..1165798 (-)	2355	WP_000654886.1	ribonuclease R	-
L3475_RS05920 (L3475_05875)	secG	1165900..1166133 (-)	234	WP_000282517.1	preprotein translocase subunit SecG	-
L3475_RS05925 (L3475_05880)	rpmG	1166173..1166322 (-)	150	WP_001810029.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38243.86 Da
• Isoelectric Point: 8.9865

>NTDB_id=651320 L3475_RS05900 WP_000495909.1 1161112..1162065(-) (coiA) [Streptococcus pneumoniae strain 3238/09]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQHFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=651320 L3475_RS05900 WP_000495909.1 1161112..1162065(-) (coiA) [Streptococcus pneumoniae strain 3238/09]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTAAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGATATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGCACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

3D structure

• AlphaFold DB: A0A0H2UPP6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	100	100	1
coiA	Streptococcus pneumoniae Rx1	99.369	100	0.994
coiA	Streptococcus pneumoniae D39	99.369	100	0.994
coiA	Streptococcus pneumoniae R6	99.369	100	0.994
coiA	Streptococcus mitis NCTC 12261	89.274	100	0.893
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435