Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   L2Z33_RS17915 Genome accession   NZ_CP091343
Coordinates   3727084..3728214 (-) Length   376 a.a.
NCBI ID   WP_002019199.1    Uniprot ID   A0A9P3CX21
Organism   Acinetobacter baumannii strain AB222-VUB     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3722084..3733214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z33_RS17890 (L2Z33_17890) - 3722259..3723023 (-) 765 WP_000786954.1 AraC family transcriptional regulator -
  L2Z33_RS17895 (L2Z33_17895) - 3723045..3724259 (-) 1215 WP_000372838.1 MFS transporter -
  L2Z33_RS17900 (L2Z33_17900) - 3724396..3725046 (+) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -
  L2Z33_RS17905 (L2Z33_17905) - 3725152..3726072 (+) 921 WP_002023238.1 DMT family transporter -
  L2Z33_RS17910 (L2Z33_17910) - 3726464..3727033 (-) 570 WP_000633612.1 Sua5/YciO/YrdC/YwlC family protein -
  L2Z33_RS17915 (L2Z33_17915) dprA 3727084..3728214 (-) 1131 WP_002019199.1 DNA-processing protein DprA Machinery gene
  L2Z33_RS17920 (L2Z33_17920) tsaP 3728235..3729389 (-) 1155 WP_000755268.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  L2Z33_RS17925 (L2Z33_17925) def 3729512..3730042 (+) 531 WP_001196539.1 peptide deformylase -
  L2Z33_RS17930 (L2Z33_17930) - 3730079..3730507 (+) 429 WP_000231984.1 DUF2946 family protein -
  L2Z33_RS17935 (L2Z33_17935) - 3730580..3732694 (+) 2115 WP_001120667.1 TonB-dependent copper receptor -
  L2Z33_RS17940 (L2Z33_17940) - 3732748..3732954 (+) 207 WP_000182542.1 hypothetical protein -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41958.53 Da        Isoelectric Point: 6.6659

>NTDB_id=649717 L2Z33_RS17915 WP_002019199.1 3727084..3728214(-) (dprA) [Acinetobacter baumannii strain AB222-VUB]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVNEFQTPQSQAQFEQLVQQV
RQHTDFILTPDDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASTHQRTIAVTGTGLDTTYPAQNKKLAEHILAKNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLIVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=649717 L2Z33_RS17915 WP_002019199.1 3727084..3728214(-) (dprA) [Acinetobacter baumannii strain AB222-VUB]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTGGGGCTAC
ATGCTAATCACTTAAAGCGTGTAAACGAATTTCAAACGCCCCAAAGTCAAGCGCAGTTTGAACAACTTGTACAACAAGTT
CGTCAGCATACGGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATCACCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAAATTGCGATTGTCGGTAGCCGAAAGCCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCCTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGCGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTACTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTAAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CACCATTACAACAACATTTTCCACGGAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGCGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCCACTCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATCTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAGCTTATAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGACTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

98.936

100

0.989

  dprA Acinetobacter baumannii D1279779

98.138

100

0.981

  dprA Acinetobacter baylyi ADP1

70.079

100

0.71

  dprA Vibrio cholerae strain A1552

42.9

88.032

0.378