Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   L2Z44_RS15960 Genome accession   NZ_CP091333
Coordinates   3321182..3322312 (+) Length   376 a.a.
NCBI ID   WP_031945614.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain DSM30011-VUB     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3316182..3327312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z44_RS15935 (L2Z44_15935) - 3316478..3316684 (-) 207 WP_000182542.1 hypothetical protein -
  L2Z44_RS15940 (L2Z44_15940) - 3316738..3318816 (-) 2079 WP_075400792.1 TonB-dependent copper receptor -
  L2Z44_RS15945 (L2Z44_15945) - 3318889..3319317 (-) 429 WP_000231981.1 DUF2946 family protein -
  L2Z44_RS15950 (L2Z44_15950) def 3319354..3319884 (-) 531 WP_001196539.1 peptide deformylase -
  L2Z44_RS15955 (L2Z44_15955) tsaP 3320007..3321161 (+) 1155 WP_005112499.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  L2Z44_RS15960 (L2Z44_15960) dprA 3321182..3322312 (+) 1131 WP_031945614.1 DNA-processing protein DprA Machinery gene
  L2Z44_RS15965 (L2Z44_15965) - 3322363..3322932 (+) 570 WP_000633612.1 Sua5/YciO/YrdC/YwlC family protein -
  L2Z44_RS15970 (L2Z44_15970) - 3323324..3324244 (-) 921 WP_102891857.1 DMT family transporter -
  L2Z44_RS15975 (L2Z44_15975) - 3324350..3325000 (-) 651 WP_085940599.1 TetR/AcrR family transcriptional regulator -
  L2Z44_RS15980 (L2Z44_15980) - 3325137..3326351 (+) 1215 WP_000372838.1 MFS transporter -
  L2Z44_RS15985 (L2Z44_15985) - 3326373..3327137 (+) 765 WP_075400794.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41803.33 Da        Isoelectric Point: 6.4984

>NTDB_id=649283 L2Z44_RS15960 WP_031945614.1 3321182..3322312(+) (dprA) [Acinetobacter baumannii strain DSM30011-VUB]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGSCEKATQPDGLAKWSSLGLHANHLKRVSEFQTPQGQAQFEQLVQQV
VQHTDFILTPDDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASTHQRTIAVTGTGLDTTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=649283 L2Z44_RS15960 WP_031945614.1 3321182..3322312(+) (dprA) [Acinetobacter baumannii strain DSM30011-VUB]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAGTTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTAGGGCTAC
ATGCTAATCACTTAAAACGCGTAAGCGAGTTTCAAACGCCCCAAGGTCAGGCGCAGTTTGAACAACTTGTACAACAAGTT
GTTCAACATACGGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATCACCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAAATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCCTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGCGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTACTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGTGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAACTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

98.404

100

0.984

  dprA Acinetobacter baumannii D1279779

98.138

100

0.981

  dprA Acinetobacter baylyi ADP1

70.604

100

0.715

  dprA Vibrio cholerae strain A1552

43.202

88.032

0.38