Detailed information NTG0064911

Bioinformatically predicted

Overview

• Name: comB
• Type: Regulator
• Locus tag: H020_RS0100250
• Genome accession: NZ_AKVY01000001
• Coordinates: 42982..44331 (+)
• Length: 449 a.a.
• NCBI ID: WP_000801611.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae TIGR4
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 37982..49331

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H020_RS0100215	plsX	38101..39093 (+)	993	WP_000717458.1	phosphate acyltransferase PlsX	-
H020_RS0100220	-	39099..39332 (+)	234	WP_000136447.1	acyl carrier protein	-
H020_RS0100225	-	39369..39668 (+)	300	Protein_35	transposase family protein	-
H020_RS0100230	blpU	39871..40101 (+)	231	WP_001093487.1	bacteriocin-like peptide BlpU	-
H020_RS14470	-	40104..40229 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
H020_RS0100245	comA	40816..42969 (+)	2154	WP_000668284.1	peptide cleavage/export ABC transporter ComA	Regulator
H020_RS0100250	comB	42982..44331 (+)	1350	WP_000801611.1	competence pheromone export protein ComB	Regulator
H020_RS0100255	purC	44501..45208 (+)	708	WP_000043309.1	phosphoribosylaminoimidazolesuccinocarboxamide synthase	-
H020_RS14580	-	45210..45353 (+)	144	WP_050167432.1	hypothetical protein	-
H020_RS0100260	-	45410..49135 (+)	3726	WP_000361188.1	phosphoribosylformylglycinamidine synthase	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 49601.49 Da
• Isoelectric Point: 5.5642

>NTDB_id=64911 H020_RS0100250 WP_000801611.1 42982..44331(+) (comB) [Streptococcus pneumoniae TIGR4]
MKPEFLESAEFYNRRYHNFSSSVIVPMALLLVFLLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILVNHLEENKL
VKKGDLLVQYQEGAEGVQAESYASQLDMLKDQKKQLEYLQKSLQEGENHFPEEDKFGYQATFRDYISQAGSLRASTSQQN
ETIASQNAAASQTQAEIGNLISQTEAKIRDYQTAKSAIETGASLAGQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQIS
QLESSLATYRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDKGKVTASEDGVLH
LNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKYVARIKVGDSVRYTTTHDAGNQLFLDSTITSIDATATKTEK
GNFFKIEAETNLTSEQAEKLRYGVEGRLQMITGKKSYLRYYLDQFLNKE

Nucleotide

• Length: 1350 bp

>NTDB_id=64911 H020_RS0100250 WP_000801611.1 42982..44331(+) (comB) [Streptococcus pneumoniae TIGR4]
ATGAAACCAGAATTTTTAGAAAGTGCGGAGTTTTATAATCGTCGTTACCATAATTTTTCCAGTAGTGTGATTGTACCCAT
GGCCCTTCTGCTTGTGTTTTTACTTGGCTTTGCAACTGTTGCAGAGAAGGAGATGAGTTTGTCCACTAGAGCTACTGTCG
AACCTAGTCGTATCCTTGCAAATATCCAGTCAACTAGCAACAATCGTATTCTTGTCAATCATTTGGAAGAAAATAAGCTG
GTTAAGAAGGGGGATCTTTTGGTTCAATACCAAGAAGGGGCAGAGGGTGTCCAAGCGGAGTCCTATGCCAGTCAGTTGGA
CATGCTAAAGGATCAAAAAAAGCAATTGGAGTATCTGCAAAAGAGCCTGCAAGAAGGGGAGAACCACTTTCCAGAGGAGG
ATAAGTTTGGCTACCAAGCCACCTTTCGCGACTACATCAGTCAAGCAGGCAGTCTTAGGGCTAGTACATCGCAACAAAAT
GAGACCATCGCGTCCCAGAATGCAGCAGCTAGCCAAACCCAAGCCGAAATCGGCAACCTCATCAGTCAAACAGAGGCTAA
AATTCGCGATTACCAGACAGCTAAGTCAGCTATTGAAACAGGTGCTTCCTTGGCCGGTCAGAATCTAGCCTACTCTCTTT
ACCAGTCCTACAAGTCTCAGGGCGAGGAAAATCCCCAAACTAAGGTTCAGGCAGTTGCACAGGTTGAAGCACAGATTTCT
CAGTTAGAATCTAGTCTTGCTACTTACCGTGTCCAGTATGCAGGTTCAGGTACCCAGCAAGCCTATGCGTCAGGGTTAAG
CAGTCAATTGGAATCCCTTAAATCCCAACACTTGGCAAAGGTTGGTCAGGAATTGACCCTTCTAGCCCAGAAAATTTTGG
AGGCAGAGTCAGGTAAGAAGGTACAGGGAAATCTTTTAGACAAGGGGAAAGTTACGGCGAGTGAGGATGGGGTGCTTCAT
CTTAATCCTGAGACCAGTGATTCTAGCATGGTTGCAGAAGGTGCCCTACTAGCCCAACTTTATCCATCTTTGGAAAGAGA
AGGGAAAGCCAAACTCACAGCTTATCTAAGTTCAAAATATGTAGCAAGAATCAAGGTCGGTGATTCTGTTCGCTATACTA
CGACTCATGATGCCGGGAATCAACTTTTCCTAGATTCTACTATTACAAGTATTGATGCGACAGCTACTAAGACTGAGAAA
GGGAATTTCTTTAAAATCGAGGCGGAGACTAATCTAACTTCGGAGCAGGCTGAAAAACTTAGGTACGGGGTGGAAGGCCG
CTTGCAGATGATTACGGGCAAGAAAAGTTACCTACGTTATTATTTGGATCAATTTTTGAACAAAGAGTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB	Streptococcus pneumoniae TIGR4	100	100	1
comB	Streptococcus pneumoniae Rx1	98.886	100	0.989
comB	Streptococcus pneumoniae D39	98.886	100	0.989
comB	Streptococcus pneumoniae R6	98.886	100	0.989
comB	Streptococcus mitis SK321	94.655	100	0.947
comB	Streptococcus mitis NCTC 12261	94.209	100	0.942
comB	Streptococcus gordonii str. Challis substr. CH1	55.111	100	0.552