Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP/pknB   Type   Regulator
Locus tag   OHS33_RS36060 Genome accession   NZ_CP107819
Coordinates   8388654..8388905 (-) Length   83 a.a.
NCBI ID   WP_330334647.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00536     
Function   activate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 8383654..8393905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHS33_RS36040 (OHS33_36030) - 8383846..8385402 (-) 1557 WP_330334645.1 serine/threonine-protein kinase -
  OHS33_RS36045 (OHS33_36035) - 8385346..8386683 (+) 1338 WP_330334646.1 IS21 family transposase -
  OHS33_RS36050 (OHS33_36040) istB 8386680..8387495 (+) 816 WP_240804075.1 IS21-like element helper ATPase IstB -
  OHS33_RS36055 (OHS33_36045) - 8388213..8388527 (+) 315 WP_272263804.1 hypothetical protein -
  OHS33_RS36060 (OHS33_36050) stkP/pknB 8388654..8388905 (-) 252 WP_330334647.1 protein kinase Regulator
  OHS33_RS36065 (OHS33_36055) - 8389323..8389634 (-) 312 WP_330334648.1 hypothetical protein -
  OHS33_RS36070 (OHS33_36060) - 8390543..8391154 (+) 612 WP_330334649.1 hypothetical protein -
  OHS33_RS36075 (OHS33_36065) - 8392023..8392472 (+) 450 WP_330334650.1 hypothetical protein -
  OHS33_RS36080 (OHS33_36070) - 8392702..8393013 (-) 312 Protein_7122 inositol monophosphatase family protein -

Sequence

Protein


Download         Length: 83 a.a.        Molecular weight: 9271.55 Da        Isoelectric Point: 6.2255

>NTDB_id=646637 OHS33_RS36060 WP_330334647.1 8388654..8388905(-) (stkP/pknB) [Streptomyces sp. NBC_00536]
MERGELIAGRYELEKRLGRGGMGEVWAGRDRMLHRDVAVKMLVLDDAVHADLPRRFEREAVAAAQISHPNVVALYDRGVD
GDS

Nucleotide


Download         Length: 252 bp        

>NTDB_id=646637 OHS33_RS36060 WP_330334647.1 8388654..8388905(-) (stkP/pknB) [Streptomyces sp. NBC_00536]
GTGGAGCGCGGTGAGCTGATCGCGGGGCGGTACGAGCTGGAGAAGCGGCTCGGGCGGGGCGGCATGGGGGAGGTGTGGGC
CGGGCGAGACCGGATGCTGCACCGGGATGTGGCGGTCAAGATGCTGGTGCTCGACGATGCGGTGCACGCGGATCTGCCGC
GCCGGTTCGAGCGGGAGGCCGTGGCGGCTGCGCAGATCAGCCATCCGAACGTGGTCGCTCTGTACGACCGCGGGGTTGAT
GGGGATTCTTGA

Domains

Predicted by InterProScan.

Protein kinase domain (Pkinase)

(11-76)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP/pknB Streptococcus salivarius strain HSISS4

43.038

95.181

0.41
  pknB Streptococcus mutans UA159

42.105

91.566

0.386
  stkP Streptococcus pneumoniae Rx1

40.789

91.566

0.373
  stkP Streptococcus pneumoniae D39

40.789

91.566

0.373
  stkP Streptococcus pneumoniae R6

40.789

91.566

0.373
  stkP Streptococcus pneumoniae TIGR4

40.789

91.566

0.373