Detailed information NTG0064559

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: SPB_RS07745
• Genome accession: NZ_AEUT02000001
• Coordinates: 1540936..1541862 (-)
• Length: 308 a.a.
• NCBI ID: WP_003104826.1
• Uniprot ID: -
• Organism: Streptococcus parauberis NCFD 2020
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1535936..1546862

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPB_RS07735 (SPB_1594)	amiF	1538920..1539864 (-)	945	WP_003104982.1	ATP-binding cassette domain-containing protein	Regulator
SPB_RS07740 (SPB_1595)	amiE	1539857..1540927 (-)	1071	WP_003104172.1	ABC transporter ATP-binding protein	Regulator
SPB_RS07745 (SPB_1596)	amiD	1540936..1541862 (-)	927	WP_003104826.1	oligopeptide ABC transporter permease OppC	Regulator
SPB_RS07750 (SPB_1597)	amiC	1541862..1543361 (-)	1500	WP_037621210.1	ABC transporter permease	Regulator
SPB_RS07755 (SPB_1598)	amiA3	1543429..1545408 (-)	1980	WP_003102586.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34431.17 Da
• Isoelectric Point: 6.9724

>NTDB_id=64559 SPB_RS07745 WP_003104826.1 1540936..1541862(-) (amiD) [Streptococcus parauberis NCFD 2020]
MASIDKSKFEFVELDSYASEVIDAPSYSYWKSVFRQFFSRKSTIVMLVILIAIILMSFVYPMFANYDFGDVSNINDFSKR
YISPNGEYWFGTDKNGQSLFDGVWYGARNSILISVIATAINMIVGVVVGGLWGVSKAVDKVMIEVYNVISNLPQMLIIIV
LTYSIGAGFWNLIFAFCVTGWIGIAYAVRVQVLRYRDLEYNLASQTLGTPTYKIVSKNLLPQLVSVIVSMVSLLLPAYIS
SEAFLSFFGLGLPLSEPSLGRLISNYSSYLTTNAYLFWIPLTTLILVSLPLYIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=64559 SPB_RS07745 WP_003104826.1 1540936..1541862(-) (amiD) [Streptococcus parauberis NCFD 2020]
ATGGCGTCTATAGATAAAAGCAAGTTCGAATTTGTCGAGCTAGATAGTTATGCATCAGAAGTCATTGATGCCCCTTCCTA
TTCATACTGGAAATCAGTATTTAGACAATTCTTTTCACGTAAATCTACTATTGTAATGTTAGTTATTTTAATTGCAATCA
TCCTAATGAGTTTTGTATATCCGATGTTTGCTAACTATGACTTTGGTGATGTGTCAAACATTAATGATTTCTCTAAACGC
TATATCTCTCCAAATGGGGAATATTGGTTTGGTACAGACAAAAATGGTCAGTCACTCTTTGATGGTGTTTGGTATGGTGC
TAGAAACTCGATCCTAATTTCCGTTATTGCTACAGCAATCAATATGATTGTTGGGGTAGTTGTTGGTGGCCTTTGGGGAG
TTTCAAAAGCAGTTGATAAGGTAATGATTGAAGTCTACAATGTTATTTCTAACTTACCTCAAATGCTTATCATTATTGTC
TTAACTTATTCAATTGGTGCTGGTTTCTGGAATCTTATCTTTGCCTTCTGTGTAACTGGATGGATAGGGATTGCTTATGC
TGTCCGTGTCCAAGTACTCCGTTACCGTGATTTAGAGTATAACTTAGCCAGTCAAACACTAGGAACACCAACTTACAAAA
TTGTATCCAAAAATTTATTACCACAGTTAGTTTCTGTTATTGTATCAATGGTTTCTCTTTTGTTACCAGCCTACATTTCA
TCAGAAGCCTTCTTATCATTTTTTGGTTTAGGATTACCATTGTCAGAACCAAGTTTAGGCCGTTTGATTTCAAATTATTC
ATCATATTTGACAACAAACGCTTACCTATTCTGGATTCCATTAACTACTCTTATTCTAGTATCTCTTCCACTTTATATAG
TTGGACAAAACTTAGCAGATGCTAGTGACCCAAGAACACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.701	100	0.737
amiD	Streptococcus thermophilus LMG 18311	73.052	100	0.731
amiD	Streptococcus thermophilus LMD-9	73.052	100	0.731