Detailed information NTG0064513

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7Q98_RS21370
• Genome accession: NZ_AP021914
• Coordinates: 4479156..4480181 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WP2-W18-CRE-03
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4474156..4485181

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7Q98_RS21360 (WP2W18C03_41450)	rpmE	4476387..4476599 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7Q98_RS21365 (WP2W18C03_41460)	priA	4476802..4479000 (+)	2199	WP_001440832.1	primosomal protein N'	Machinery gene
H7Q98_RS21370 (WP2W18C03_41470)	cytR	4479156..4480181 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
H7Q98_RS21375 (WP2W18C03_41480)	ftsN	4480273..4481232 (+)	960	WP_000068834.1	cell division protein FtsN	-
H7Q98_RS21380 (WP2W18C03_41490)	hslV	4481325..4481855 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7Q98_RS21385 (WP2W18C03_41500)	hslU	4481865..4483196 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
H7Q98_RS21390 (WP2W18C03_41510)	menA	4483263..4484189 (+)	927	WP_001307494.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7Q98_RS21395 (WP2W18C03_41520)	rraA	4484282..4484767 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7Q98_RS21400 (WP2W18C03_41530)	zapB	4484852..4485097 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=64513 H7Q98_RS21370 WP_000644904.1 4479156..4480181(+) (cytR) [Escherichia coli strain WP2-W18-CRE-03]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=64513 H7Q98_RS21370 WP_000644904.1 4479156..4480181(+) (cytR) [Escherichia coli strain WP2-W18-CRE-03]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628