Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | L0F67_RS04250 | Genome accession | NZ_CP090556 |
| Coordinates | 838166..838531 (-) | Length | 121 a.a. |
| NCBI ID | WP_015674357.1 | Uniprot ID | K0G001 |
| Organism | Actinobacillus suis strain D20_277 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 833166..843531
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F67_RS04235 (L0F67_04230) | - | 833959..834579 (+) | 621 | WP_015674354.1 | MerR family transcriptional regulator | - |
| L0F67_RS04240 (L0F67_04235) | gshAB | 834671..836944 (-) | 2274 | WP_015674355.1 | bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB | - |
| L0F67_RS04245 (L0F67_04240) | asd | 837094..837987 (-) | 894 | WP_015674356.1 | archaetidylserine decarboxylase | - |
| L0F67_RS04250 (L0F67_04245) | comEA/comE1 | 838166..838531 (-) | 366 | WP_015674357.1 | ComEA family DNA-binding protein | Machinery gene |
| L0F67_RS04255 (L0F67_04250) | - | 838870..840255 (+) | 1386 | WP_015674358.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| L0F67_RS04260 (L0F67_04255) | - | 840328..840783 (+) | 456 | WP_081541476.1 | MliC family protein | - |
| L0F67_RS04265 (L0F67_04260) | waaF | 840866..841903 (+) | 1038 | WP_015674360.1 | lipopolysaccharide heptosyltransferase II | - |
| L0F67_RS04270 (L0F67_04265) | rfaC | 841979..842938 (+) | 960 | WP_015674361.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| L0F67_RS04275 (L0F67_04270) | rpsL | 843062..843436 (+) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 12794.68 Da Isoelectric Point: 9.6912
>NTDB_id=643415 L0F67_RS04250 WP_015674357.1 838166..838531(-) (comEA/comE1) [Actinobacillus suis strain D20_277]
MKTPSKLGLSLLIGMLSTGVLAAEKTKPSVTEPTPVVQNAQATSPEHSHAEMTNNANLVNINIATAAEIQDKLVGIGAKK
AQAIVEYRTKNGAFSSLEQLTDVSGIGKATLDKNRDRILLQ
MKTPSKLGLSLLIGMLSTGVLAAEKTKPSVTEPTPVVQNAQATSPEHSHAEMTNNANLVNINIATAAEIQDKLVGIGAKK
AQAIVEYRTKNGAFSSLEQLTDVSGIGKATLDKNRDRILLQ
Nucleotide
Download Length: 366 bp
>NTDB_id=643415 L0F67_RS04250 WP_015674357.1 838166..838531(-) (comEA/comE1) [Actinobacillus suis strain D20_277]
ATGAAAACACCTTCAAAACTTGGCTTAAGTCTGTTAATCGGTATGTTATCTACCGGTGTATTAGCTGCTGAAAAAACAAA
GCCTAGTGTCACAGAACCCACTCCCGTGGTTCAAAACGCACAAGCAACCAGCCCTGAACATAGCCATGCTGAAATGACAA
ACAATGCAAATTTAGTCAATATCAATATCGCAACAGCAGCGGAAATCCAAGATAAATTAGTCGGTATTGGCGCTAAAAAA
GCACAAGCAATTGTTGAATACCGTACAAAAAACGGTGCATTTAGTAGCCTAGAGCAACTTACCGATGTATCCGGTATCGG
CAAAGCTACACTGGATAAAAATCGTGATCGCATCCTATTGCAATAA
ATGAAAACACCTTCAAAACTTGGCTTAAGTCTGTTAATCGGTATGTTATCTACCGGTGTATTAGCTGCTGAAAAAACAAA
GCCTAGTGTCACAGAACCCACTCCCGTGGTTCAAAACGCACAAGCAACCAGCCCTGAACATAGCCATGCTGAAATGACAA
ACAATGCAAATTTAGTCAATATCAATATCGCAACAGCAGCGGAAATCCAAGATAAATTAGTCGGTATTGGCGCTAAAAAA
GCACAAGCAATTGTTGAATACCGTACAAAAAACGGTGCATTTAGTAGCCTAGAGCAACTTACCGATGTATCCGGTATCGG
CAAAGCTACACTGGATAAAAATCGTGATCGCATCCTATTGCAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.504 |
100 |
0.595 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
50.526 |
78.512 |
0.397 |
| comEA | Acinetobacter baumannii strain A118 |
35.878 |
100 |
0.388 |
| comEA | Vibrio cholerae C6706 |
48.387 |
76.86 |
0.372 |
| comEA | Vibrio cholerae strain A1552 |
48.387 |
76.86 |
0.372 |