Detailed information NTG0643186

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LOD78_RS06240
• Genome accession: NZ_CP090522
• Coordinates: 1226806..1227744 (-)
• Length: 312 a.a.
• NCBI ID: WP_274505115.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain SS17
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1221806..1232744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOD78_RS06215 (LOD78_06210)	prsA	1222079..1223065 (-)	987	WP_274505112.1	peptidylprolyl isomerase PrsA	-
LOD78_RS06220 (LOD78_06215)	-	1223128..1223847 (-)	720	WP_216806635.1	O-methyltransferase	-
LOD78_RS06225 (LOD78_06220)	-	1223922..1224470 (-)	549	WP_274505113.1	DUF6630 family protein	-
LOD78_RS06230 (LOD78_06225)	-	1224483..1224929 (-)	447	WP_172035738.1	hypothetical protein	-
LOD78_RS06235 (LOD78_06230)	pepF	1224931..1226733 (-)	1803	WP_274505114.1	oligoendopeptidase F	Regulator
LOD78_RS06240 (LOD78_06235)	coiA	1226806..1227744 (-)	939	WP_274505115.1	competence protein CoiA family protein	Machinery gene
LOD78_RS06245 (LOD78_06240)	metG	1227808..1229811 (-)	2004	WP_274505116.1	methionine--tRNA ligase	-
LOD78_RS06250 (LOD78_06245)	-	1229966..1230559 (+)	594	WP_171988751.1	DUF1361 domain-containing protein	-
LOD78_RS06255 (LOD78_06250)	-	1230603..1230986 (-)	384	WP_274505117.1	hypothetical protein	-
LOD78_RS06260 (LOD78_06255)	-	1231614..1231727 (-)	114	WP_337999555.1	putative holin-like toxin	-

Sequence

Protein

• Length: 312 a.a.
• Molecular weight: 36490.38 Da
• Isoelectric Point: 8.3763

>NTDB_id=643186 LOD78_RS06240 WP_274505115.1 1226806..1227744(-) (coiA) [Streptococcus parasuis strain SS17]
MLIAIDEDGQVFNVLENPAPQGRYFCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENESTQHLSLKSCLYRWLVKAER
VELEKCLPELGQIADLFVNDCLVMEVQCSSLPISRLQLRTQAYREAGYLVLWLLGKDLWLKERLTNLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLEILRQPFAKQILSSMTCPMDEDLPRYIAQQLYYKSPKWL
ALQAEAYGRGENLLTKTVFDWFPHIRLPRSAIGFAQIQVNLNSVYQDFDGYYARVKDKRNQVLYPPVIYLKK

Nucleotide

• Length: 939 bp

>NTDB_id=643186 LOD78_RS06240 WP_274505115.1 1226806..1227744(-) (coiA) [Streptococcus parasuis strain SS17]
ATGTTAATTGCAATTGATGAAGATGGGCAAGTTTTTAATGTCTTGGAAAATCCTGCGCCACAAGGTCGATATTTTTGTCC
AGGTTGTGGAGGCCTAGTCCGATACAAATCCGGAAAAGTTCTGCGTTCGCACTTTGCCCACGTCACCCTGCGGGACTGCC
ACTATTTTTCCGAGAATGAGTCCACCCAACATCTGTCCCTCAAGTCTTGTCTGTACAGGTGGTTAGTCAAGGCCGAACGA
GTTGAACTTGAAAAATGCCTGCCGGAGTTAGGTCAGATAGCGGACTTATTTGTCAATGATTGTTTAGTCATGGAAGTCCA
ATGTTCCAGTCTGCCGATTTCTCGTTTACAGCTGAGGACGCAAGCCTATCGTGAGGCTGGTTATCTGGTTCTTTGGTTGC
TTGGCAAGGATTTGTGGCTCAAGGAACGACTGACCAATTTGCACAAGCAATTTCTCTCTTTTAGTATGAATATGGGTTTT
CACCTCTGGGAATTGGATGACGAGAAAAAAGAATTGCGGCTCCGTTACCTTATTCATGAAGACTTAAGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGGAAATCTTGCGTCAGCCCTTTGCCAAGCAAATCCTAT
CTAGCATGACTTGTCCTATGGATGAGGATTTGCCTCGCTACATTGCTCAACAGCTTTATTACAAATCCCCCAAATGGCTC
GCTCTGCAAGCGGAAGCTTATGGACGTGGAGAAAATCTACTGACCAAGACAGTATTTGACTGGTTTCCCCACATCCGACT
GCCCCGCTCTGCCATTGGCTTTGCCCAGATACAGGTAAATTTGAACTCGGTTTACCAGGACTTTGATGGCTATTATGCTA
GGGTTAAAGACAAGAGAAATCAAGTCCTTTATCCACCAGTTATTTACCTTAAAAAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (6-240)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	53.871	99.359	0.535
coiA	Streptococcus pneumoniae TIGR4	51.613	99.359	0.513
coiA	Streptococcus pneumoniae Rx1	51.613	99.359	0.513
coiA	Streptococcus pneumoniae D39	51.613	99.359	0.513
coiA	Streptococcus pneumoniae R6	51.613	99.359	0.513
coiA	Lactococcus lactis subsp. cremoris KW2	42.812	100	0.439