Detailed information NTG0642921

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: IHC89_RS14650
• Genome accession: NZ_CP090495
• Coordinates: 3168126..3169658 (-)
• Length: 510 a.a.
• NCBI ID: WP_237031219.1
• Uniprot ID: -
• Organism: Photobacterium damselae subsp. damselae strain AS-15-0759-2
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3163126..3174658

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IHC89_RS14625 (IHC89_14625)	-	3164168..3164341 (+)	174	WP_005302173.1	hypothetical protein	-
IHC89_RS14630 (IHC89_14630)	-	3164517..3164783 (+)	267	WP_005302176.1	YihD family protein	-
IHC89_RS14635 (IHC89_14635)	ccoG	3164972..3166309 (+)	1338	WP_331253322.1	cytochrome c oxidase accessory protein CcoG	-
IHC89_RS14640 (IHC89_14640)	-	3166352..3167341 (+)	990	WP_005302181.1	serine/threonine protein kinase	-
IHC89_RS14645 (IHC89_14645)	-	3167431..3168030 (+)	600	WP_370466075.1	thiol:disulfide interchange protein DsbA/DsbL	-
IHC89_RS14650 (IHC89_14650)	comM	3168126..3169658 (-)	1533	WP_237031219.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
IHC89_RS14655 (IHC89_14655)	ilvG	3170198..3171844 (+)	1647	WP_237031220.1	acetolactate synthase 2 catalytic subunit	-
IHC89_RS14660 (IHC89_14660)	ilvM	3171847..3172104 (+)	258	WP_036764608.1	acetolactate synthase 2 small subunit	-
IHC89_RS14665 (IHC89_14665)	-	3172144..3173073 (+)	930	WP_065171002.1	branched-chain amino acid transaminase	-

Sequence

Protein

• Length: 510 a.a.
• Molecular weight: 55175.53 Da
• Isoelectric Point: 8.2787

>NTDB_id=642921 IHC89_RS14650 WP_237031219.1 3168126..3169658(-) (comM) [Photobacterium damselae subsp. damselae strain AS-15-0759-2]
MSLAIVHSRACVGVQAPAVTVEVHLSNGMPSFTLVGLPETTVKEAKDRVRSAIFNANFEFPSRRITVNLAPADLPKEGGR
FDLPIALGILAASGQIPAESLHKYEFLGELALSGQLRPVKGALPAALAALKAKRCLIVPDRNGDQVALVGEKQHKSAPDL
IQVCAHLLGQQSLSLRFQTKPDDDLLDLTQGRDMQDIIGQQQGKRALEIAAAGGHNLLFLGPPGTGKTMLASRLCDLLPP
MSHDEALETAAVASLTQQSIHQGNWLQRPLRAPHHSSSMAALVGGGSIPRPGEISLAHNGILFLDEMPEFERKVLDSLRE
PLESGEIVISRATSKATFPANFQLIGALNPSPTGFYEGAQTRTNPQVILRYLSKLSGPLLDRFDMSIEIPALPKGTLAQG
GERGESTPVIKARVNQARTLMDQRAGKVNARLSTRELDKHCVLAREDAEFLENALHQLGLSIRAYHRIIKVARTIADLSN
CEQIERAHLAEALGYRAMDRLLKQLTAQAI

Nucleotide

• Length: 1533 bp

>NTDB_id=642921 IHC89_RS14650 WP_237031219.1 3168126..3169658(-) (comM) [Photobacterium damselae subsp. damselae strain AS-15-0759-2]
ATGTCATTGGCCATTGTGCATAGCCGGGCTTGCGTTGGGGTACAAGCTCCAGCAGTAACTGTTGAAGTTCATTTAAGTAA
TGGAATGCCCAGTTTTACTCTGGTGGGTTTACCTGAGACAACGGTAAAAGAGGCCAAAGATCGGGTTCGAAGTGCCATTT
TTAATGCCAATTTTGAGTTTCCCTCTCGGCGAATTACCGTCAATTTAGCTCCCGCTGATTTGCCTAAAGAAGGGGGCCGA
TTTGACTTACCCATCGCGCTTGGAATTTTAGCTGCTTCAGGACAAATACCCGCAGAATCACTGCATAAATATGAATTTTT
AGGGGAGTTAGCTTTATCAGGGCAATTGCGTCCGGTAAAGGGGGCACTGCCTGCTGCTCTTGCTGCATTAAAGGCTAAAA
GGTGTTTGATTGTCCCTGATCGTAATGGCGATCAAGTGGCATTAGTAGGTGAAAAACAACATAAGTCAGCGCCTGATTTG
ATCCAAGTTTGCGCTCACCTATTAGGACAGCAAAGTTTATCTTTACGGTTTCAAACAAAACCCGATGATGATTTGTTAGA
TCTGACTCAGGGGCGAGATATGCAAGATATTATTGGTCAGCAGCAAGGTAAGCGCGCATTGGAAATCGCAGCTGCTGGTG
GCCATAATCTTCTGTTTCTTGGCCCTCCAGGAACGGGAAAAACCATGTTAGCCTCTCGGTTATGTGATTTATTACCTCCC
ATGAGCCATGATGAGGCGTTAGAAACTGCAGCTGTTGCCTCGCTGACTCAGCAGAGCATTCATCAAGGCAATTGGTTACA
ACGACCGCTACGTGCACCTCATCATTCAAGTTCTATGGCTGCCTTAGTTGGAGGTGGTTCAATTCCAAGGCCAGGAGAGA
TCTCTTTGGCGCATAATGGCATTCTTTTTTTAGATGAAATGCCCGAATTTGAGCGTAAGGTTTTGGACTCATTACGAGAA
CCTTTAGAGTCGGGAGAGATTGTGATTTCTCGGGCAACCAGTAAAGCAACCTTTCCAGCAAATTTTCAATTGATTGGAGC
GCTAAATCCGAGTCCAACAGGATTTTATGAAGGCGCACAAACTCGAACTAATCCTCAAGTTATTTTGCGCTATCTCAGTA
AACTCTCTGGCCCGCTGCTTGATAGGTTTGATATGTCGATTGAGATCCCTGCTCTGCCGAAAGGTACTTTAGCTCAAGGT
GGCGAGCGCGGTGAGAGTACTCCTGTGATTAAAGCGCGAGTTAATCAGGCGCGAACCTTAATGGATCAGCGAGCAGGAAA
AGTGAATGCTCGACTCTCTACTCGGGAGTTAGATAAACATTGCGTTCTGGCTCGAGAAGATGCGGAGTTTCTTGAAAATG
CATTGCATCAGTTGGGGTTATCGATTCGTGCGTACCACCGCATTATTAAGGTGGCGCGAACCATTGCCGATTTAAGTAAT
TGTGAGCAGATAGAGCGAGCGCATTTAGCTGAAGCGTTAGGATATCGAGCGATGGATCGGTTATTGAAGCAGTTAACGGC
TCAAGCGATATGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (404-496)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (193-394)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio campbellii strain DS40M4	76.667	100	0.767
comM	Vibrio cholerae strain A1552	76.471	100	0.765
comM	Glaesserella parasuis strain SC1401	63.333	100	0.633
comM	Haemophilus influenzae Rd KW20	62.525	99.412	0.622
comM	Legionella pneumophila str. Paris	49.9	97.843	0.488
comM	Legionella pneumophila strain ERS1305867	49.9	97.843	0.488
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	42.941	100	0.429