Detailed information NTG0641690

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OGM40_RS14545
• Genome accession: NZ_CP107155
• Coordinates: 3003120..3004145 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain R11
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2998120..3009145

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OGM40_RS14515 (OGM40_14485)	zapB	2998204..2998449 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
OGM40_RS14520 (OGM40_14490)	rraA	2998534..2999019 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
OGM40_RS14525 (OGM40_14495)	menA	2999112..3000038 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OGM40_RS14530 (OGM40_14500)	hslU	3000105..3001436 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
OGM40_RS14535 (OGM40_14505)	hslV	3001446..3001976 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
OGM40_RS14540 (OGM40_14510)	ftsN	3002069..3003028 (-)	960	WP_000068834.1	cell division protein FtsN	-
OGM40_RS14545 (OGM40_14515)	cytR	3003120..3004145 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
OGM40_RS14550 (OGM40_14520)	priA	3004301..3006499 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
OGM40_RS14555 (OGM40_14525)	rpmE	3006702..3006914 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
OGM40_RS14560 (OGM40_14530)	yiiX	3006975..3007583 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
OGM40_RS14565 (OGM40_14535)	metJ	3007643..3007960 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=641690 OGM40_RS14545 WP_000644908.1 3003120..3004145(-) (cytR) [Escherichia coli strain R11]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=641690 OGM40_RS14545 WP_000644908.1 3003120..3004145(-) (cytR) [Escherichia coli strain R11]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625