Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LXN49_RS05565 Genome accession   NZ_CP090354
Coordinates   1154464..1154661 (+) Length   65 a.a.
NCBI ID   WP_024425054.1    Uniprot ID   A0AAX0Z5U3
Organism   Bacillus safensis strain H31R-08     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1149464..1159661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXN49_RS05535 (LXN49_05535) - 1149881..1150060 (+) 180 WP_008348517.1 YjzC family protein -
  LXN49_RS05540 (LXN49_05540) - 1150224..1151489 (+) 1266 WP_024425058.1 MFS transporter -
  LXN49_RS05545 (LXN49_05545) - 1151601..1151795 (-) 195 WP_003211779.1 YjzD family protein -
  LXN49_RS05550 (LXN49_05550) - 1152008..1152748 (+) 741 WP_024425057.1 hypothetical protein -
  LXN49_RS05555 (LXN49_05555) - 1152822..1153397 (+) 576 WP_234107709.1 nad binding enzyme -
  LXN49_RS05560 (LXN49_05560) med 1153489..1154451 (+) 963 WP_234107710.1 BMP family ABC transporter substrate-binding protein Regulator
  LXN49_RS05565 (LXN49_05565) comZ 1154464..1154661 (+) 198 WP_024425054.1 ComZ family protein Regulator
  LXN49_RS05570 (LXN49_05570) - 1154672..1154905 (-) 234 WP_024426489.1 hypothetical protein -
  LXN49_RS05575 (LXN49_05575) - 1155077..1156015 (+) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  LXN49_RS05580 (LXN49_05580) fabF 1156037..1157278 (+) 1242 WP_024425051.1 beta-ketoacyl-ACP synthase II -
  LXN49_RS05585 (LXN49_05585) - 1157356..1158159 (+) 804 WP_234107711.1 DUF2268 domain-containing protein -
  LXN49_RS05590 (LXN49_05590) - 1158309..1159289 (+) 981 WP_025093401.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7405.45 Da        Isoelectric Point: 4.1652

>NTDB_id=641584 LXN49_RS05565 WP_024425054.1 1154464..1154661(+) (comZ) [Bacillus safensis strain H31R-08]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLEPEALQPLLTLFTSVMQEAYELGKADAESEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=641584 LXN49_RS05565 WP_024425054.1 1154464..1154661(+) (comZ) [Bacillus safensis strain H31R-08]
ATGCAGCACGAAAAATCGATGGAATTTTTACAAATTGCCATGAAGTATTTTCCGCAGGCGAAGGAAGAGTTAGATAAAGC
AGGGATTCAGCTTGAGCCTGAAGCACTTCAGCCGCTTCTAACATTATTTACATCTGTCATGCAAGAAGCATACGAGCTTG
GAAAAGCAGATGCAGAATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677