Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LXF01_RS04055 Genome accession   NZ_CP090067
Coordinates   829737..830120 (+) Length   127 a.a.
NCBI ID   WP_078191060.1    Uniprot ID   -
Organism   Acinetobacter sp. SH20PTE14     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 824737..835120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXF01_RS04045 (LXF01_04045) - 827650..828753 (-) 1104 WP_233945044.1 efflux RND transporter periplasmic adaptor subunit -
  LXF01_RS04050 (LXF01_04050) - 828800..829393 (-) 594 WP_233945418.1 hypothetical protein -
  LXF01_RS04055 (LXF01_04055) pilG 829737..830120 (+) 384 WP_078191060.1 twitching motility response regulator PilG Regulator
  LXF01_RS04060 (LXF01_04060) - 830150..830518 (+) 369 WP_078191059.1 response regulator -
  LXF01_RS04065 (LXF01_04065) - 830525..831061 (+) 537 WP_078191058.1 chemotaxis protein CheW -
  LXF01_RS04070 (LXF01_04070) - 831106..833181 (+) 2076 WP_078192256.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14213.27 Da        Isoelectric Point: 4.7065

>NTDB_id=640539 LXF01_RS04055 WP_078191060.1 829737..830120(+) (pilG) [Acinetobacter sp. SH20PTE14]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVVTAVDGFEALSKIADANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=640539 LXF01_RS04055 WP_078191060.1 829737..830120(+) (pilG) [Acinetobacter sp. SH20PTE14]
ATGGACGATAAATTCCAAAATCTAAAAGTCATGGTAATTGATGATTCAAAAACCATTCGTCGTACGGCCGAAACGCTGCT
TCAGCGTGAAGGATGTGAAGTAGTCACTGCTGTAGATGGTTTTGAAGCACTTTCAAAAATTGCAGATGCGAATCCAGATA
TCGTATTTGTCGATATAATGATGCCACGTCTAGATGGCTATCAAACTTGTGCCCTGATTAAAAACTCTCAAAATTATCAA
AATATTCCTGTGATTATGCTTTCAAGTAAAGATGGTTTATTTGATCAGGCGAAGGGTCGTGTTGTAGGTTCTGATGAATA
CTTGACTAAGCCATTCAGTAAAGATGAATTGCTGAATGCAATCCGTAATCACGTTACAGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

41.026

92.126

0.378
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37