Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   ODS73_RS03200 Genome accession   NZ_CP107038
Coordinates   597251..597517 (+) Length   88 a.a.
NCBI ID   WP_001814186.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain BM6001     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 592251..602517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ODS73_RS03180 (ODS73_03180) - 592515..593024 (+) 510 WP_000619939.1 N-acetyltransferase -
  ODS73_RS03185 (ODS73_03185) pheT 593101..595506 (+) 2406 WP_001865060.1 phenylalanine--tRNA ligase subunit beta -
  ODS73_RS03190 (ODS73_03190) - 595574..596575 (-) 1002 WP_000597984.1 endonuclease/exonuclease/phosphatase family protein -
  ODS73_RS03195 (ODS73_03195) - 596722..597125 (+) 404 Protein_630 helix-turn-helix domain-containing protein -
  ODS73_RS03200 (ODS73_03200) HI0659 597251..597517 (+) 267 WP_001814186.1 helix-turn-helix domain-containing protein Machinery gene
  ODS73_RS03205 (ODS73_03205) metE 597778..600027 (+) 2250 WP_000108219.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ODS73_RS03210 (ODS73_03210) metF 600091..600957 (+) 867 WP_001277841.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9641.11 Da        Isoelectric Point: 4.2720

>NTDB_id=640096 ODS73_RS03200 WP_001814186.1 597251..597517(+) (HI0659) [Streptococcus pneumoniae strain BM6001]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGESSLQLDTVLKVLTSLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=640096 ODS73_RS03200 WP_001814186.1 597251..597517(+) (HI0659) [Streptococcus pneumoniae strain BM6001]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAGAGAGCAGTCTTCAGTTGGATACGGTCTTAAAAGTTCTAACCAGTCTAGGAAAGACACTAGCAGTC
GTTCCACTTGAACAGGGGAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

55.844

87.5

0.489