Detailed information NTG0634868

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CSB63_RS04490
• Genome accession: NZ_CP089060
• Coordinates: 817835..818674 (+)
• Length: 279 a.a.
• NCBI ID: WP_116920213.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain CH8
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 812835..823674

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSB63_RS04460 (CSB63_0896)	-	813250..813777 (+)	528	WP_014608250.1	ECF transporter S component	-
CSB63_RS04465 (CSB63_0897)	-	813801..814316 (+)	516	WP_011681082.1	transcription repressor NadR	-
CSB63_RS04470 (CSB63_0898)	-	814411..815100 (+)	690	WP_011681083.1	XRE family transcriptional regulator	-
CSB63_RS04475 (CSB63_0899)	ylqF	815228..816082 (+)	855	WP_011681084.1	ribosome biogenesis GTPase YlqF	-
CSB63_RS04480 (CSB63_0900)	-	816069..816836 (+)	768	WP_116920212.1	ribonuclease HII	-
CSB63_RS04485 (CSB63_0901)	-	816847..817767 (+)	921	WP_014608255.1	ROK family protein	-
CSB63_RS04490 (CSB63_0902)	dprA	817835..818674 (+)	840	WP_116920213.1	DNA-processing protein DprA	Machinery gene
CSB63_RS04495 (CSB63_0903)	topA	818842..820986 (+)	2145	WP_134973217.1	type I DNA topoisomerase	-
CSB63_RS04500 (CSB63_0904)	-	821139..822314 (-)	1176	WP_099421264.1	IS256-like element IS1191 family transposase	-
CSB63_RS04505 (CSB63_0905)	-	822425..823249 (+)	825	WP_011227157.1	TraX family protein	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31260.22 Da
• Isoelectric Point: 8.4536

>NTDB_id=634868 CSB63_RS04490 WP_116920213.1 817835..818674(+) (dprA) [Streptococcus thermophilus strain CH8]
MNNFELFKLKAAGLTNLNILNILDYQKNQDKKLSLRDMAVVSKSKNAVLFMEKYKNLDVKQLKEDFQRFPTLSIFDKEYP
IELKHSYNPPVLLFYQGNIDLLSKPKLAVVGARKCSETGKQSVRKIVHELGNAFTIVSGLASGIDTCAHMEALKNRGNTI
AVIGTGLDVYYPKENKALQDYMIKNHLVLTEYGPGEQPLKYHFPERNRIISGLCQGVMVVEAKLRSGSLITCERAMEEGR
DVFVIPGNILDGKSDGCHHLIQEGAKCITTGFDIISEFS

Nucleotide

• Length: 840 bp

>NTDB_id=634868 CSB63_RS04490 WP_116920213.1 817835..818674(+) (dprA) [Streptococcus thermophilus strain CH8]
ATGAATAACTTTGAACTTTTTAAACTAAAAGCTGCTGGATTGACGAATTTAAACATCCTTAACATTTTAGACTATCAAAA
AAATCAAGATAAAAAATTGAGCTTACGTGATATGGCAGTGGTATCTAAGTCTAAAAATGCCGTTCTCTTTATGGAAAAAT
ACAAGAATTTAGATGTTAAGCAGCTTAAGGAAGATTTTCAACGTTTTCCGACCTTATCAATTTTTGATAAGGAGTATCCC
ATTGAGCTGAAACATTCCTATAATCCTCCTGTCCTCCTCTTTTATCAAGGGAATATTGATTTGCTAAGTAAACCCAAGTT
AGCAGTAGTTGGTGCCAGAAAGTGTTCTGAAACAGGCAAACAGTCTGTTCGAAAAATTGTTCATGAACTTGGGAATGCCT
TTACTATTGTAAGTGGCTTAGCGAGTGGAATTGATACTTGTGCTCATATGGAGGCCTTAAAAAATAGAGGTAACACCATT
GCAGTTATCGGGACTGGACTAGACGTATATTATCCTAAAGAAAACAAAGCTTTACAGGACTATATGATTAAAAATCATTT
AGTTCTTACAGAATACGGACCGGGTGAACAGCCACTTAAATACCATTTTCCTGAACGAAATCGGATAATTTCTGGATTGT
GTCAAGGGGTTATGGTGGTTGAAGCCAAGCTTCGCTCGGGAAGTCTTATTACTTGTGAGCGTGCAATGGAAGAAGGAAGA
GATGTTTTCGTCATACCAGGAAATATTTTAGATGGAAAATCGGATGGATGCCATCACCTCATTCAAGAGGGCGCAAAGTG
CATTACTACAGGATTTGACATCATTTCAGAATTTTCATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	72.043	100	0.72
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.309	99.642	0.631
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.95	99.642	0.627
dprA/cilB/dalA	Streptococcus mitis SK321	62.95	99.642	0.627
dprA	Lactococcus lactis subsp. cremoris KW2	59.712	99.642	0.595
dprA	Latilactobacillus sakei subsp. sakei 23K	39.382	92.832	0.366