Detailed information NTG0632567

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: LQZ07_RS03200
• Genome accession: NZ_CP088080
• Coordinates: 689782..690732 (+)
• Length: 316 a.a.
• NCBI ID: WP_227981429.1
• Uniprot ID: -
• Organism: Agarivorans sp. B2Z047
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 684782..695732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LQZ07_RS03175 (LQZ07_03175)	-	684996..685943 (+)	948	WP_152783276.1	ABC transporter permease subunit	-
LQZ07_RS03180 (LQZ07_03180)	-	686041..686763 (-)	723	WP_152783278.1	hypothetical protein	-
LQZ07_RS03185 (LQZ07_03185)	-	686804..687538 (-)	735	WP_152783280.1	sulfite exporter TauE/SafE family protein	-
LQZ07_RS03190 (LQZ07_03190)	-	687762..689132 (+)	1371	WP_152783282.1	aspartate aminotransferase family protein	-
LQZ07_RS03195 (LQZ07_03195)	-	689287..689700 (+)	414	WP_152783284.1	CBS domain-containing protein	-
LQZ07_RS03200 (LQZ07_03200)	comM	689782..690732 (+)	951	WP_227981429.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
LQZ07_RS03205 (LQZ07_03205)	-	690848..693187 (+)	2340	WP_227981430.1	hypothetical protein	-
LQZ07_RS03210 (LQZ07_03210)	-	693181..694572 (+)	1392	WP_227981431.1	hypothetical protein	-
LQZ07_RS03215 (LQZ07_03215)	-	694638..695600 (+)	963	WP_227981432.1	hypothetical protein	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 32879.94 Da
• Isoelectric Point: 6.0192

>NTDB_id=632567 LQZ07_RS03200 WP_227981429.1 689782..690732(+) (comM) [Agarivorans sp. B2Z047]
MGLAIVKTCTLVGMEALNVTVEVHLANGLPAFSIVGLPETSVKEAKDRVRSAILNSGFSFPAKRITVNLAPADVPKSGGR
FDLPIAIGILAAAGDVPLACLNDMAFCGELALSGAIRPVSGAIATALSISQQGLTLVTSEQDADAAVRVPEAKVHGSASL
QQLSAGLNGQSAFNLKDSQVIEPQFNESLLDMSEVHGQHLAKRALELAAAGAHNLLMMGPPGTGKTMLASRLPGILPSLT
EQQAIEVAAINSVSAQQRELEQWYIPPFRSPHHSASMVALVGGGSNPKPGEITLAHHGVLFLDELQLIPMMVGCQS

Nucleotide

• Length: 951 bp

>NTDB_id=632567 LQZ07_RS03200 WP_227981429.1 689782..690732(+) (comM) [Agarivorans sp. B2Z047]
ATGGGTTTAGCGATAGTTAAAACGTGTACCTTAGTGGGCATGGAAGCCTTAAATGTGACTGTAGAAGTGCATTTAGCCAA
TGGTTTGCCTGCCTTTTCTATTGTAGGTCTACCAGAAACCTCGGTTAAAGAAGCTAAAGATAGAGTTCGTAGCGCCATTC
TCAATAGTGGCTTTTCCTTTCCTGCAAAACGCATTACCGTAAATCTAGCGCCTGCAGATGTTCCCAAAAGTGGAGGTCGT
TTTGATCTGCCAATTGCTATTGGTATTTTGGCCGCCGCTGGTGATGTTCCACTAGCATGTTTAAATGACATGGCGTTTTG
CGGTGAGCTGGCTTTATCGGGAGCAATTCGCCCAGTAAGCGGAGCAATTGCCACCGCCTTATCAATAAGCCAGCAGGGTT
TAACCTTGGTGACTAGCGAGCAAGATGCCGACGCAGCGGTAAGAGTGCCAGAGGCAAAAGTACATGGCAGCGCCAGCTTG
CAGCAGTTAAGTGCTGGTCTTAATGGCCAAAGCGCTTTCAACTTGAAGGACTCTCAAGTTATTGAGCCGCAGTTTAACGA
AAGCCTCTTAGATATGAGCGAAGTGCACGGTCAACATCTAGCAAAACGTGCTTTAGAACTAGCTGCCGCCGGCGCGCATA
ATCTGTTAATGATGGGCCCTCCAGGTACCGGAAAAACTATGTTGGCGAGTCGTTTACCGGGCATATTACCCAGCTTAACC
GAGCAACAAGCCATAGAGGTGGCGGCAATTAACTCGGTAAGCGCTCAGCAACGAGAGCTAGAGCAATGGTACATTCCGCC
TTTTCGTAGCCCGCATCATAGTGCCTCAATGGTCGCGCTGGTGGGCGGTGGTTCAAACCCTAAGCCCGGCGAAATAACCT
TAGCCCATCATGGTGTTCTTTTTTTGGACGAACTGCAGCTAATCCCAATGATGGTGGGTTGTCAAAGCTAA

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-306)

• Subunit ChlI of Mg-chelatase (ChlI) (21-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	53.77	96.519	0.519
comM	Haemophilus influenzae Rd KW20	52.922	97.468	0.516
comM	Vibrio campbellii strain DS40M4	52.787	96.519	0.509
comM	Glaesserella parasuis strain SC1401	50.814	97.152	0.494
comM	Legionella pneumophila str. Paris	50.162	97.785	0.491
comM	Legionella pneumophila strain ERS1305867	50.162	97.785	0.491
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	41.234	97.468	0.402