Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LP088_RS01375 Genome accession   NZ_CP087814
Coordinates   253738..254085 (+) Length   115 a.a.
NCBI ID   WP_036388546.1    Uniprot ID   A0AAQ2QAX3
Organism   Moraxella bovis strain SAM109238     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 248738..259085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LP088_RS01350 - 248762..249085 (+) 324 WP_264676321.1 surface lipoprotein assembly modifier -
  LP088_RS01355 - 249082..249456 (+) 375 WP_112742695.1 surface lipoprotein assembly modifier -
  LP088_RS01360 (LP088_01335) - 249453..251144 (-) 1692 WP_078274809.1 HAMP domain-containing sensor histidine kinase -
  LP088_RS01365 (LP088_01340) - 251272..251994 (-) 723 WP_029103939.1 response regulator transcription factor -
  LP088_RS01370 (LP088_01345) - 252226..253503 (-) 1278 WP_162860448.1 hypothetical protein -
  LP088_RS01375 (LP088_01350) pilG 253738..254085 (+) 348 WP_036388546.1 response regulator Regulator
  LP088_RS01380 (LP088_01355) - 254149..254523 (+) 375 WP_078274806.1 response regulator -
  LP088_RS01385 (LP088_01360) - 254527..255057 (+) 531 WP_112742693.1 chemotaxis protein CheW -
  LP088_RS01390 (LP088_01365) - 255338..257401 (+) 2064 WP_228157718.1 methyl-accepting chemotaxis protein -
  LP088_RS01395 (LP088_01370) - 257421..258290 (+) 870 WP_078274804.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 115 a.a.        Molecular weight: 13006.05 Da        Isoelectric Point: 5.8811

>NTDB_id=631593 LP088_RS01375 WP_036388546.1 253738..254085(+) (pilG) [Moraxella bovis strain SAM109238]
MIIDDSKTIRRTAEALLQKEGCEVITAVDGFDALSKIVETNPDIIFVDIMMPRLDGYQTCSMIKNHPEYAQKPVIMLSSK
DGLFDKARGRIVGSNEYLTKPFSKEDLFATISRFR

Nucleotide


Download         Length: 348 bp        

>NTDB_id=631593 LP088_RS01375 WP_036388546.1 253738..254085(+) (pilG) [Moraxella bovis strain SAM109238]
ATGATTATTGACGACTCAAAAACCATCCGTCGTACCGCCGAAGCCCTACTCCAAAAAGAAGGCTGTGAAGTGATTACTGC
CGTTGATGGCTTTGATGCTTTATCAAAAATCGTTGAGACTAACCCTGACATCATCTTTGTGGACATTATGATGCCACGTC
TTGATGGGTATCAAACCTGCTCAATGATTAAAAATCACCCAGAATACGCCCAAAAACCTGTCATCATGCTATCGTCCAAA
GATGGTCTGTTTGACAAAGCTCGTGGACGTATCGTGGGCTCAAACGAGTATTTGACCAAACCATTTAGTAAAGAAGACTT
GTTTGCGACCATCAGTCGCTTTCGCTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.378

96.522

0.757
  vicR Streptococcus mutans UA159

44.144

96.522

0.426
  micA Streptococcus pneumoniae Cp1015

39.64

96.522

0.383
  pilH Synechocystis sp. PCC 6803

37.719

99.13

0.374
  chiS Vibrio cholerae strain A1552

37.838

96.522

0.365