Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LP101_RS01030 Genome accession   NZ_CP087796
Coordinates   230317..230664 (+) Length   115 a.a.
NCBI ID   WP_036388546.1    Uniprot ID   A0AAQ2QAX3
Organism   Moraxella bovis strain SAM57957     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 225317..235664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LP101_RS01010 (LP101_00990) - 225360..226034 (+) 675 WP_264683848.1 surface lipoprotein assembly modifier -
  LP101_RS01015 (LP101_00995) - 226031..227722 (-) 1692 WP_264683849.1 hybrid sensor histidine kinase/response regulator -
  LP101_RS01020 (LP101_01000) - 227850..228572 (-) 723 WP_264677403.1 response regulator transcription factor -
  LP101_RS01025 (LP101_01005) - 228805..230082 (-) 1278 WP_264677402.1 hypothetical protein -
  LP101_RS01030 (LP101_01010) pilG 230317..230664 (+) 348 WP_036388546.1 response regulator Regulator
  LP101_RS01035 (LP101_01015) - 230728..231102 (+) 375 WP_078274806.1 response regulator -
  LP101_RS01040 (LP101_01020) - 231106..231636 (+) 531 WP_078274805.1 chemotaxis protein CheW -
  LP101_RS01045 (LP101_01025) - 231917..233980 (+) 2064 WP_264683850.1 methyl-accepting chemotaxis protein -
  LP101_RS01050 - 234000..234635 (+) 636 WP_264677400.1 CheR family methyltransferase -
  LP101_RS01055 - 234661..234870 (+) 210 WP_264677399.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 115 a.a.        Molecular weight: 13006.05 Da        Isoelectric Point: 5.8811

>NTDB_id=631459 LP101_RS01030 WP_036388546.1 230317..230664(+) (pilG) [Moraxella bovis strain SAM57957]
MIIDDSKTIRRTAEALLQKEGCEVITAVDGFDALSKIVETNPDIIFVDIMMPRLDGYQTCSMIKNHPEYAQKPVIMLSSK
DGLFDKARGRIVGSNEYLTKPFSKEDLFATISRFR

Nucleotide


Download         Length: 348 bp        

>NTDB_id=631459 LP101_RS01030 WP_036388546.1 230317..230664(+) (pilG) [Moraxella bovis strain SAM57957]
ATGATTATTGACGACTCAAAAACCATCCGTCGTACCGCCGAAGCCCTACTCCAAAAAGAAGGCTGTGAAGTGATTACTGC
CGTTGATGGCTTTGATGCTTTATCAAAAATCGTTGAGACTAACCCTGACATCATCTTTGTGGACATTATGATGCCACGTC
TTGATGGGTATCAAACCTGCTCAATGATTAAAAATCACCCAGAATACGCCCAAAAACCTGTCATCATGCTATCGTCCAAA
GATGGTCTGTTTGACAAAGCTCGTGGACGTATCGTGGGCTCAAACGAGTATTTGACCAAACCATTTAGTAAAGAAGACTT
GTTTGCGACCATCAGTCGCTTTCGCTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.378

96.522

0.757
  vicR Streptococcus mutans UA159

44.144

96.522

0.426
  micA Streptococcus pneumoniae Cp1015

39.64

96.522

0.383
  pilH Synechocystis sp. PCC 6803

37.719

99.13

0.374
  chiS Vibrio cholerae strain A1552

37.838

96.522

0.365