Detailed information NTG0631312

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: LP363_RS02755
• Genome accession: NZ_CP087763
• Coordinates: 571007..573166 (+)
• Length: 719 a.a.
• NCBI ID: WP_230630702.1
• Uniprot ID: -
• Organism: Lactobacillus gasseri strain Lg637
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 566007..578166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LP363_RS02730 (LP363_02730)	udk	566412..567047 (-)	636	WP_186433583.1	uridine kinase	-
LP363_RS02735 (LP363_02735)	-	567209..568576 (+)	1368	WP_095669897.1	MFS transporter	-
LP363_RS02740 (LP363_02740)	-	568720..568869 (+)	150	WP_230630698.1	lactacin F inducer peptide precursor	-
LP363_RS02745 (LP363_02745)	-	569466..570200 (+)	735	WP_230630700.1	sensor histidine kinase	-
LP363_RS02750 (LP363_02750)	-	570197..570994 (+)	798	Protein_530	LytR/AlgR family response regulator transcription factor	-
LP363_RS02755 (LP363_02755)	comA	571007..573166 (+)	2160	WP_230630702.1	peptide cleavage/export ABC transporter	Regulator
LP363_RS02760 (LP363_02760)	-	573177..573770 (+)	594	WP_095669893.1	HlyD family efflux transporter periplasmic adaptor subunit	-
LP363_RS02765 (LP363_02765)	-	573820..574104 (+)	285	WP_095669892.1	bacteriocin immunity protein	-
LP363_RS02770 (LP363_02770)	-	574373..574606 (+)	234	WP_095669891.1	hypothetical protein	-
LP363_RS02775 (LP363_02775)	-	575009..575290 (+)	282	WP_095669890.1	hypothetical protein	-
LP363_RS02780 (LP363_02780)	-	575714..576112 (+)	399	WP_095669888.1	hypothetical protein	-
LP363_RS02790 (LP363_02790)	-	576562..576840 (+)	279	WP_095669887.1	hypothetical protein	-

Sequence

Protein

• Length: 719 a.a.
• Molecular weight: 80973.41 Da
• Isoelectric Point: 8.3332

>NTDB_id=631312 LP363_RS02755 WP_230630702.1 571007..573166(+) (comA) [Lactobacillus gasseri strain Lg637]
MLFKYKSVYVPQVDEMDCGVACLAMILKQYHSRVSLAHLRHEARTNLEGTTALGLVKTAQKFNFKTEAVKADMSLFDENS
IQYPFIVHVLKQGELLHYYVVLKNAKNYLVIADPDPSVGVIKMPKDRFAQEWTGIALFMVPNEDFEPIKEKKNNLWSLFP
YMFKQKRLMINIILAALLMTIISICSSYFVQGIIDTYIPDGTYQTLSILAVGLLIAYVFNSIFSYGQNFLLNILGQRLSI
DLNLQYIRHIFELPMEFFVTRRTGEITSRFSDASRIIDALASTVISLFLDLSIVIVMGLVLAAQNMTLFGITLLALPVYA
VVILGFTKKFEKLNNEQMESNAVLSSSVIEDIQGIETIKALNSEDTRYRRIDSQFVDYLKKSFKYSKTESLQTALKTFIQ
LSLNVIVLWVGAKVVMQGQLSIGQLMTFNALLAYFIDPLQSIINLQPRLQSASVAQNRLNEVYQVKSEFDKKTMVNNPAL
LEGTISYDKVDYRYGYGADVLKDINLKISQGEKLTIVGMSGSGKSTMVKLLVDFFSPSKGQVTLNGHATSEINKHTLRSY
VNYVPQTPYIFSGTVKENLLLGSRPDITEEDVIKACQIAGIDQEITNLPLQFETKLDEKAKILSGGQKQRLTIARALLFP
AKVFIFDEVTSGLDTITEKKVVDNLMKLKDKTIIFIAHRLAIAERADKVIVIDHGQIVEEGSHSELMSKPGFYYDLVKG

Nucleotide

• Length: 2160 bp

>NTDB_id=631312 LP363_RS02755 WP_230630702.1 571007..573166(+) (comA) [Lactobacillus gasseri strain Lg637]
ATGTTATTCAAATATAAATCCGTATACGTGCCACAAGTGGATGAGATGGATTGTGGGGTTGCTTGTTTAGCAATGATCTT
AAAGCAATATCATTCTCGCGTATCTTTAGCACATTTACGTCATGAAGCTCGTACTAATCTTGAAGGCACAACTGCTTTAG
GACTAGTAAAGACAGCACAAAAATTTAATTTCAAAACAGAAGCCGTAAAAGCAGATATGTCTTTATTTGATGAGAATAGT
ATTCAATATCCTTTTATTGTCCACGTCCTAAAACAAGGAGAACTACTTCATTATTATGTAGTTCTTAAAAATGCTAAGAA
TTATTTAGTAATTGCAGATCCTGATCCGTCAGTTGGTGTAATAAAGATGCCTAAAGATAGGTTTGCTCAAGAATGGACAG
GGATTGCACTCTTTATGGTTCCTAATGAAGACTTTGAACCAATCAAAGAAAAGAAGAATAATTTATGGTCTCTCTTTCCA
TATATGTTTAAACAAAAGCGGCTGATGATTAATATCATTTTAGCCGCTTTATTAATGACCATAATTAGTATTTGCAGTTC
ATATTTTGTTCAAGGAATAATTGATACTTACATTCCAGATGGAACCTATCAGACTCTTTCGATCTTAGCTGTTGGACTAT
TAATTGCTTATGTCTTCAATTCTATCTTCTCCTATGGACAGAACTTTTTACTAAATATTTTAGGTCAAAGATTAAGTATT
GATCTAAATCTGCAATACATCAGGCATATTTTTGAATTACCAATGGAATTTTTTGTAACGAGAAGAACGGGTGAAATTAC
TTCACGTTTTTCTGATGCAAGTAGAATTATTGACGCTTTGGCAAGTACAGTTATTTCGCTCTTCTTAGACCTCTCAATTG
TGATTGTGATGGGATTAGTTTTAGCAGCGCAAAATATGACATTATTTGGGATTACATTATTAGCTTTACCAGTATATGCA
GTTGTAATTTTAGGCTTTACTAAAAAGTTCGAAAAACTAAATAATGAACAAATGGAGAGTAATGCGGTTCTTAGTTCTTC
TGTAATTGAAGATATTCAAGGAATTGAAACTATTAAGGCTTTAAATAGTGAAGATACCAGATATAGAAGAATTGATAGTC
AATTTGTAGATTACTTAAAGAAGTCATTTAAATATAGTAAGACTGAGAGTTTGCAGACAGCACTCAAGACATTTATTCAA
TTATCTCTTAATGTAATTGTTCTTTGGGTTGGTGCAAAAGTTGTAATGCAAGGACAATTGAGCATTGGTCAGTTAATGAC
TTTTAATGCGTTGCTGGCATATTTCATTGATCCACTGCAAAGTATTATTAATTTACAACCGCGTCTGCAATCAGCCAGTG
TTGCGCAGAACAGATTAAATGAAGTTTATCAAGTAAAAAGTGAATTTGATAAGAAAACTATGGTTAATAATCCAGCGTTA
TTAGAAGGAACAATCTCATATGATAAAGTTGATTATCGATATGGCTATGGCGCAGATGTTTTAAAAGATATTAATCTCAA
AATTAGTCAGGGCGAAAAATTAACGATTGTTGGAATGAGTGGTTCTGGAAAATCTACGATGGTTAAGTTGTTAGTAGATT
TCTTTTCGCCAAGTAAAGGTCAGGTTACATTAAATGGACATGCAACAAGTGAAATTAATAAGCATACGTTGCGGTCATAT
GTGAATTATGTACCTCAAACTCCATATATCTTTTCTGGAACAGTTAAGGAGAATTTGTTGTTAGGATCTAGACCAGATAT
CACTGAAGAAGATGTAATAAAGGCTTGTCAGATTGCTGGGATTGACCAAGAGATAACTAATCTACCACTGCAATTTGAAA
CAAAATTAGATGAAAAAGCAAAAATTCTATCTGGTGGACAAAAACAAAGGTTAACAATTGCTCGGGCATTATTGTTTCCT
GCAAAGGTATTTATTTTTGATGAAGTAACAAGTGGCTTAGATACAATTACCGAGAAGAAGGTAGTTGATAATTTGATGAA
GCTAAAGGACAAGACAATTATTTTTATCGCCCATCGTCTAGCAATTGCAGAACGTGCAGACAAGGTAATTGTAATTGATC
ATGGTCAAATAGTTGAAGAAGGCAGCCACAGCGAATTGATGAGTAAGCCTGGCTTTTATTATGACTTAGTGAAGGGATAG

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (169-439)

• ABC transporter (ABC_tran) (501-651)

• Peptidase C39 family (Peptidase_C39) (7-143)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	56.742	99.026	0.562
comA	Streptococcus mitis SK321	56.461	99.026	0.559
comA	Streptococcus pneumoniae Rx1	56.32	99.026	0.558
comA	Streptococcus pneumoniae D39	56.32	99.026	0.558
comA	Streptococcus pneumoniae R6	56.32	99.026	0.558
comA	Streptococcus pneumoniae TIGR4	56.18	99.026	0.556
comA	Streptococcus gordonii str. Challis substr. CH1	55.056	99.026	0.545
comA/nlmT	Streptococcus mutans UA159	53.748	98.331	0.529